RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	CNGA4	Q8IV77	575 aa		13.53	□□□□□ -0.24
POLE-222	ENST00000545015	TP53INP2	Q8IXH6	220 aa		13.53	□□□□□ -0.24
POLE-222	ENST00000545015	PNPLA1	Q8N8W4	532 aa		13.53	□□□□□ -0.24
POLE-222	ENST00000545015	RNF214	Q8ND24	703 aa		13.53	□□□□□ -0.24
POLE-222	ENST00000545015	CXorf40A	Q8TE69	158 aa		13.53	□□□□□ -0.24
POLE-222	ENST00000545015	FAF2	Q96CS3	445 aa		13.53	□□□□□ -0.24
POLE-222	ENST00000545015	CHP1	Q99653	195 aa		13.53	□□□□□ -0.24
POLE-222	ENST00000545015	MYOC	Q99972	504 aa		13.53	□□□□□ -0.24
POLE-222	ENST00000545015	ZNF670	Q9BS34	389 aa		13.53	□□□□□ -0.24
POLE-222	ENST00000545015	CINP	Q9BW66	212 aa	Predicted RBP	13.53	□□□□□ -0.24
POLE-222	ENST00000545015	C1QTNF7	Q9BXJ2	289 aa		13.53	□□□□□ -0.24
POLE-222	ENST00000545015	DEF6	Q9H4E7	631 aa		13.53	□□□□□ -0.24
POLE-222	ENST00000545015	TP53BP1	Q12888	1972 aa	Predicted RBP	13.52	□□□□□ -0.24
POLE-222	ENST00000545015		A0A1W2PQ67	120 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	ZNF487	B1APH4	448 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	C1QTNF9B	B2RNN3	333 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	ENC1	O14682	589 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	RIOK3	O14730	519 aa	Known RBP	13.52	□□□□□ -0.25
POLE-222	ENST00000545015	MUSK	O15146	869 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	AKR1B10	O60218	316 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	PIAS2	O75928	621 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	TM7SF2	O76062	418 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	LDOC1	O95751	146 aa	Predicted RBP	13.52	□□□□□ -0.25
POLE-222	ENST00000545015	CSF2	P04141	144 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	KRT7	P08729	469 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	C1QTNF9	P0C862	333 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	GIMD1	P0DJR0	217 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	NME1	P15531	152 aa	Known RBP	13.52	□□□□□ -0.25
POLE-222	ENST00000545015	DGKA	P23743	735 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	MMP12	P39900	470 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	CDH6	P55285	790 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	YPEL5	P62699	121 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	BCL2L1	Q07817	233 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	SLC10A7	Q0GE19	358 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	ZNF211	Q13398	564 aa	Predicted RBP	13.52	□□□□□ -0.25
POLE-222	ENST00000545015	DPYSL3	Q14195	570 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	FZD2	Q14332	565 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	PAFAH1B3	Q15102	231 aa	Known RBP	13.52	□□□□□ -0.25
POLE-222	ENST00000545015	ST3GAL2	Q16842	350 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	PROX2	Q3B8N5	592 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	PARG	Q86W56	976 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	VSIG1	Q86XK7	387 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	CAMK1D	Q8IU85	385 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	GALNT15	Q8N3T1	639 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	SLC25A45	Q8N413	288 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	TEX26	Q8N6G2	289 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	EID2	Q8N6I1	236 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.52	□□□□□ -0.25
POLE-222	ENST00000545015	OR4C6	Q8NH72	309 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	FATE1	Q969F0	183 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	CNDP2	Q96KP4	475 aa	Known RBP	13.52	□□□□□ -0.25
POLE-222	ENST00000545015	TBATA	Q96M53	351 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	CCDC42	Q96M95	316 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	MGME1	Q9BQP7	344 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	CALN1	Q9BXU9	219 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.52	□□□□□ -0.25
POLE-222	ENST00000545015	PCDH12	Q9NPG4	1184 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	INTU	Q9ULD6	942 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	ATP8A1	Q9Y2Q0	1164 aa		13.52	□□□□□ -0.25
POLE-222	ENST00000545015	SPEG	Q15772	3267 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	FRY	Q5TBA9	3013 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.51	□□□□□ -0.25
POLE-222	ENST00000545015	MAP1B	P46821	2468 aa	Known RBP	13.51	□□□□□ -0.25
POLE-222	ENST00000545015	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.51	□□□□□ -0.25
POLE-222	ENST00000545015	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.51	□□□□□ -0.25
POLE-222	ENST00000545015	HTRA2	O43464	458 aa	Predicted RBP	13.51	□□□□□ -0.25
POLE-222	ENST00000545015	MMP20	O60882	483 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	SOCS5	O75159	536 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	CAPNS1	P04632	268 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	CD48	P09326	243 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	XPA	P23025	273 aa	Predicted RBP	13.51	□□□□□ -0.25
POLE-222	ENST00000545015	IGFALS	P35858	605 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	ARHGAP25	P42331	645 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	ACADVL	P49748	655 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	ADK	P55263	362 aa	Known RBP	13.51	□□□□□ -0.25
POLE-222	ENST00000545015	TAS2R40	P59535	323 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.51	□□□□□ -0.25	6e-7	■■■■□ 24.9
POLE-222	ENST00000545015	POLR2L	P62875	67 aa	Known RBP	13.51	□□□□□ -0.25
POLE-222	ENST00000545015	KRT81	Q14533	505 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	ERAP2	Q6P179	960 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.51	□□□□□ -0.25
POLE-222	ENST00000545015	MAP7D3	Q8IWC1	876 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	RHOT2	Q8IXI1	618 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	ATPAF2	Q8N5M1	289 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	PCDH19	Q8TAB3	1148 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	NSMCE3	Q96MG7	304 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	NUDCD1	Q96RS6	583 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	CSNK1G3	Q9Y6M4	447 aa		13.51	□□□□□ -0.25
POLE-222	ENST00000545015	USP24	Q9UPU5	2620 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.5	□□□□□ -0.25
POLE-222	ENST00000545015	SCAMP1	O15126	338 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	CKMT2	P17540	419 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	ITIH2	P19823	946 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	ACP1	P24666	158 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	PEX5	P50542	639 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	GALNT2	Q10471	571 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	RALGDS	Q12967	914 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	MMRN1	Q13201	1228 aa		13.5	□□□□□ -0.25
POLE-222	ENST00000545015	PDE1C	Q14123	709 aa	Predicted RBP	13.5	□□□□□ -0.25
POLE-222	ENST00000545015	PTK2B	Q14289	1009 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms