RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TIGD7Q6NT04 549 aaPredicted RBP15.87■□□□□ 0.13
CCDC78-216ENST00000544996 VSIG1Q86XK7 387 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 DCP2Q8IU60 420 aaKnown RBP15.87■□□□□ 0.13
CCDC78-216ENST00000544996 CAMK1GQ96NX5 476 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 LENG8Q96PV6 779 aaPredicted RBP15.87■□□□□ 0.13
CCDC78-216ENST00000544996 RNF157Q96PX1 679 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 CDC6Q99741 560 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 SCUBE2Q9NQ36 999 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 IMPACTQ9P2X3 320 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 PCOLCE2Q9UKZ9 415 aa15.87■□□□□ 0.13
CCDC78-216ENST00000544996 A0A0A6YYK5 440 aaPredicted RBP15.86■□□□□ 0.13
CCDC78-216ENST00000544996 SPAARA0A1B0GVQ0 90 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 A0A1W2PQ67 120 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 GOLGA6L6A8MZA4 724 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 SPINT1O43278 529 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 MMP20O60882 483 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 NEBLO76041 1014 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 FECHP22830 423 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 CCNCP24863 283 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 CDC25BP30305 580 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 RXRGP48443 463 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 CLDN2P57739 230 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 FGL2Q14314 439 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 TMEM52BQ4KMG9 183 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 Q6ZSR6 202 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 PTAR1Q7Z6K3 402 aaPredicted RBP15.86■□□□□ 0.13
CCDC78-216ENST00000544996 ABI3BPQ7Z7G0 1075 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 SPATS2Q86XZ4 545 aaKnown RBP15.86■□□□□ 0.13
CCDC78-216ENST00000544996 PQLC3Q8N755 202 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 DENND6BQ8NEG7 585 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 CALR3Q96L12 384 aaKnown RBP15.86■□□□□ 0.13
CCDC78-216ENST00000544996 NUDCD1Q96RS6 583 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 BAG1Q99933 345 aaPredicted RBP15.86■□□□□ 0.13
CCDC78-216ENST00000544996 MGME1Q9BQP7 344 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 WRAP53Q9BUR4 548 aaKnown RBP15.86■□□□□ 0.13
CCDC78-216ENST00000544996 PCDH12Q9NPG4 1184 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 ATP8A1Q9Y2Q0 1164 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 HYOU1Q9Y4L1 999 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 ALG6Q9Y672 507 aa15.86■□□□□ 0.13
CCDC78-216ENST00000544996 PLXNA2O75051 1894 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 RIOK3O14730 519 aaKnown RBP15.85■□□□□ 0.13
CCDC78-216ENST00000544996 APOL1O14791 398 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 MATN3O15232 486 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 RAD51BO15315 384 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 CBFA2T3O75081 653 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 SOCS5O75159 536 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 ZFXP17010 805 aaPredicted RBP15.85■□□□□ 0.13
CCDC78-216ENST00000544996 ITIH2P19823 946 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 NFKBIAP25963 317 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 RABIFP47224 123 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 FAM193AP78312 1265 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 GBE1Q04446 702 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 ITKQ08881 620 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 KYAT3Q6YP21 454 aaKnown RBP15.85■□□□□ 0.13
CCDC78-216ENST00000544996 GCNT7Q6ZNI0 430 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 TEX26Q8N6G2 289 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 CCNYQ8ND76 341 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 OR13H1Q8NG92 308 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 SAP25Q8TEE9 199 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 FATE1Q969F0 183 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 RNF25Q96BH1 459 aaPredicted RBP15.85■□□□□ 0.13
CCDC78-216ENST00000544996 ECHDC3Q96DC8 303 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 BMFQ96LC9 184 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 TSGA13Q96PP4 275 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 POLR1EQ9GZS1 481 aaKnown RBP15.85■□□□□ 0.13
CCDC78-216ENST00000544996 NT5MQ9NPB1 228 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.85■□□□□ 0.13
CCDC78-216ENST00000544996 HEY1Q9Y5J3 304 aa15.85■□□□□ 0.13
CCDC78-216ENST00000544996 C3orf70A6NLC5 250 aaPredicted RBP15.84■□□□□ 0.13
CCDC78-216ENST00000544996 TRAFD1O14545 582 aaPredicted RBP15.84■□□□□ 0.13
CCDC78-216ENST00000544996 PSTPIP1O43586 416 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 MAP3K6O95382 1288 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 CCNB1P14635 433 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 CR2P20023 1033 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 CES1P23141 567 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 EPHA8P29322 1005 aaPredicted RBP15.84■□□□□ 0.13
CCDC78-216ENST00000544996 PMLP29590 882 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 NAP1L1P55209 391 aaKnown RBP15.84■□□□□ 0.13
CCDC78-216ENST00000544996 MAXP61244 160 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 C11orf63Q6NUN7 778 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 ZSWIM9Q86XI8 627 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 GATAD2AQ86YP4 633 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 PGBD5Q8N414 524 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 SPC24Q8NBT2 197 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 PDCD6IPQ8WUM4 868 aaKnown RBP15.84■□□□□ 0.13
CCDC78-216ENST00000544996 CENPTQ96BT3 561 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 KLF6Q99612 283 aaPredicted RBP15.84■□□□□ 0.13
CCDC78-216ENST00000544996 NOD2Q9HC29 1040 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 RBM22Q9NW64 420 aaKnown RBP eCLIP15.84■□□□□ 0.13
CCDC78-216ENST00000544996 DTLQ9NZJ0 730 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 AMACRQ9UHK6 382 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 TFR2Q9UP52 801 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 PCDHGC4Q9Y5F7 938 aa15.84■□□□□ 0.13
CCDC78-216ENST00000544996 ASCC3Q8N3C0 2202 aaKnown RBP15.83■□□□□ 0.13
CCDC78-216ENST00000544996 TTC24A2A3L6 582 aaPredicted RBP15.83■□□□□ 0.12
CCDC78-216ENST00000544996 CFAP69A5D8W1 941 aa15.83■□□□□ 0.12
CCDC78-216ENST00000544996 POM121BA6NF01 834 aa15.83■□□□□ 0.12
CCDC78-216ENST00000544996 LZTS3O60299 673 aaPredicted RBP15.83■□□□□ 0.12
CCDC78-216ENST00000544996 TRIM16O95361 564 aa15.83■□□□□ 0.12
CCDC78-216ENST00000544996 MMP12P39900 470 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms