RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 CCDC154A6NI56 674 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 SLC22A2O15244 555 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ASNA1O43681 348 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 CBFA2T3O75081 653 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 SNRPB2P08579 225 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 OCM2P0CE71 109 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 OCMP0CE72 109 aaPredicted RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 ALDH7A1P49419 539 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 PLK1P53350 603 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 SLC5A3P53794 718 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 MPP1Q00013 466 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 BFSP2Q13515 415 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 TNFAIP8L3Q5GJ75 292 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 MBLAC2Q68D91 279 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ANGPTL8Q6UXH0 198 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 EP400NLQ6ZTU2 488 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ARMCX6Q7L4S7 300 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 OSTM1Q86WC4 334 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 TMEM130Q8N3G9 435 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 RNF148Q8N7C7 305 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 PTCD3Q96EY7 689 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 EBF4Q9BQW3 602 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 TRPM5Q9NZQ8 1165 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 MARCH2Q9P0N8 246 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 APPL1Q9UKG1 709 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 V9GYQ6 96 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 DYTNA2CJ06 578 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 GPR32O75388 356 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 LRIG2O94898 1065 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 UQCRBP14927 111 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 GCAP28676 217 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 GSTT1P30711 240 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 CLK1P49759 484 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS50-220ENST00000544910 SPRED3Q2MJR0 410 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ZNF618Q5T7W0 954 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 IFNLR1Q8IU57 520 aaPredicted RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 CENPLQ8N0S6 344 aaPredicted RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 ZNF786Q8N393 782 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 PCDH20Q8N6Y1 951 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 ENDOVQ8N8Q3 282 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 DIS3LQ8TF46 1054 aaKnown RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 AZIN2Q96A70 460 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 MFSD3Q96ES6 412 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 C16orf70Q9BSU1 422 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 SEMA6AQ9H2E6 1030 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 ADAMTS10Q9H324 1103 aa5.83□□□□□ -1.48
VPS50-220ENST00000544910 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS50-220ENST00000544910 ARIH1Q9Y4X5 557 aaPredicted RBP5.83□□□□□ -1.48
VPS50-220ENST00000544910 YJEFN3A6XGL0 299 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 UPP2O95045 317 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 CSPG5O95196 566 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 MT-CO1P00395 513 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 MYCP01106 439 aaPredicted RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 TKTP29401 623 aaKnown RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 TTKP33981 857 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 NOMO2Q5JPE7 1267 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 HECTD2Q5U5R9 776 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 SPRYD7Q5W111 196 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 CGB2Q6NT52 195 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 TTC7BQ86TV6 843 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 CUZD1Q86UP6 607 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 UNC5BQ8IZJ1 945 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 STX19Q8N4C7 294 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 PTGR2Q8N8N7 351 aaPredicted RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 RTP4Q96DX8 246 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 MAGED4Q96JG8 741 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 ATP13A1Q9HD20 1204 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 LATS2Q9NRM7 1088 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 PIGVQ9NUD9 493 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 GREB1LQ9C091 1923 aaPredicted RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 BTN3A1O00481 513 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 NPHS1O60500 1241 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 BAIAP3O94812 1187 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 PGK1P00558 417 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 GSNP06396 782 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 TFEBP19484 476 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 CCNG1P51959 295 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 WNT3AP56704 352 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 FOLH1Q04609 750 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 TUSC3Q13454 348 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 GALNT3Q14435 633 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 ACSBG2Q5FVE4 666 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 C6orf10Q5SRN2 563 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 FAM182AQ5T1J6 154 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 METTL21CQ5VZV1 264 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 ZBTB49Q6ZSB9 765 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 LPCAT2Q7L5N7 544 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 FAM228AQ86W67 206 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 HPS6Q86YV9 775 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 NXNL1Q96CM4 212 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 RHOBTB2Q9BYZ6 727 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 CLPBQ9H078 707 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 C1orf21Q9H246 121 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 STARD7Q9NQZ5 370 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 MYBPHLA2RUH7 354 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 CD3EAPO15446 510 aaKnown RBP5.82□□□□□ -1.48
VPS50-220ENST00000544910 ADCY6O43306 1168 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 RFPL1O75677 317 aa5.82□□□□□ -1.48
VPS50-220ENST00000544910 DLDP09622 509 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms