RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 CROCCP2Q86T23 111 aa16.08■□□□□ 0.16
XRCC1-202ENST00000543982 PCDH20Q8N6Y1 951 aaKnown RBP16.08■□□□□ 0.16
XRCC1-202ENST00000543982 PDCD6IPQ8WUM4 868 aaKnown RBP16.08■□□□□ 0.16
XRCC1-202ENST00000543982 FEM1CQ96JP0 617 aa16.08■□□□□ 0.16
XRCC1-202ENST00000543982 CEP44Q9C0F1 390 aa16.08■□□□□ 0.16
XRCC1-202ENST00000543982 TMEM245Q9H330 911 aa16.08■□□□□ 0.16
XRCC1-202ENST00000543982 CACNA2D2Q9NY47 1150 aa16.08■□□□□ 0.16
XRCC1-202ENST00000543982 IL1RAPL1Q9NZN1 696 aa16.08■□□□□ 0.16
XRCC1-202ENST00000543982 VPS18Q9P253 973 aa16.08■□□□□ 0.16
XRCC1-202ENST00000543982 KCTD3Q9Y597 815 aa16.08■□□□□ 0.16
XRCC1-202ENST00000543982 SPO11Q9Y5K1 396 aa16.08■□□□□ 0.16
XRCC1-202ENST00000543982 PIAS3Q9Y6X2 628 aa16.08■□□□□ 0.16
XRCC1-202ENST00000543982 VCANP13611 3396 aa16.08■□□□□ 0.16
XRCC1-202ENST00000543982 AURKAO14965 403 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 EGFP01133 1207 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 ASLP04424 464 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 SRPRAP08240 638 aaKnown RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 METAP1P53582 386 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 SARNPP82979 210 aaKnown RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 PTPRCAPQ14761 206 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 KRT71Q3SY84 523 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 FSTL4Q6MZW2 842 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 TRMT10BQ6PF06 316 aaKnown RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 TRPV5Q9NQA5 729 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 SLC2A6Q9UGQ3 507 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 PLA2G4CQ9UP65 541 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 PCDHB9Q9Y5E1 797 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 WASF2Q9Y6W5 498 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 TICRRQ7Z2Z1 1910 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 GOLGA6CA6NDK9 693 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 HTRA2O43464 458 aaPredicted RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 TIMM44O43615 452 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 IGSF6O95976 241 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 GSRP00390 522 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 C1QAP02745 245 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 APODP05090 189 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 GOLGA6DP0CG33 693 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 KIR2DL1P43626 348 aaPredicted RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 VASPP50552 380 aaPredicted RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 SNRPD1P62314 119 aaKnown RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 SEMG2Q02383 582 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 EFTUD2Q15029 972 aaKnown RBP eCLIP16.07■□□□□ 0.161e-11■■■■□ 19.9
XRCC1-202ENST00000543982 FNDC3BQ53EP0 1204 aaKnown RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 DNAJC21Q5F1R6 531 aaKnown RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 C9orf64Q5T6V5 341 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 C3orf62Q6ZUJ4 267 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 LINC00523Q86TU6 105 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 LPCAT1Q8NF37 534 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 PIH1D2Q8WWB5 315 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 MFSD3Q96ES6 412 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 ATP6V1G3Q96LB4 118 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 ROPN1BQ9BZX4 212 aaPredicted RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 ZDHHC6Q9H6R6 413 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 ROPN1Q9HAT0 212 aaPredicted RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 POLR3BQ9NW08 1133 aaPredicted RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 GOLGA6AQ9NYA3 693 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 THAP10Q9P2Z0 257 aaPredicted RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 ZC3H7BQ9UGR2 993 aaKnown RBP16.07■□□□□ 0.16
XRCC1-202ENST00000543982 SARDHQ9UL12 918 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 COL4A2P08572 1712 aa16.07■□□□□ 0.16
XRCC1-202ENST00000543982 BUD23O43709 281 aaKnown RBP16.06■□□□□ 0.16
XRCC1-202ENST00000543982 NDST3O95803 873 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 EPOP01588 193 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 ABHD2P08910 425 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 CES1P23141 567 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 NMBRP28336 390 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 NPY2RP49146 381 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 AP1S1P61966 158 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 EIF4HQ15056 248 aaKnown RBP16.06■□□□□ 0.16
XRCC1-202ENST00000543982 QPCTQ16769 361 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 POM121L1PQ3SYA9 428 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 CASC4Q6P4E1 433 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 STK40Q8N2I9 435 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 GRIN3AQ8TCU5 1115 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 STAMBPL1Q96FJ0 436 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 IFT43Q96FT9 208 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 VPS37BQ9H9H4 285 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 MIA3Q5JRA6 1907 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.06■□□□□ 0.16
XRCC1-202ENST00000543982 HMGB1P1B2RPK0 211 aaPredicted RBP16.06■□□□□ 0.16
XRCC1-202ENST00000543982 SIN3BO75182 1162 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 PGLSO95336 258 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 CPP00450 1065 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 F7P08709 466 aaPredicted RBP16.06■□□□□ 0.16
XRCC1-202ENST00000543982 CTPS1P17812 591 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 ZP2Q05996 745 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 TDGQ13569 410 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 SLC14A2Q15849 920 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 ARSIQ5FYB1 569 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 PPP1R2P1Q96PQ5 205 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 FAM129BQ96TA1 746 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 CENPHQ9H3R5 247 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 SMYD2Q9NRG4 433 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 BFARQ9NZS9 450 aa16.06■□□□□ 0.16
XRCC1-202ENST00000543982 KIAA1549LQ6ZVL6 1849 aa16.05■□□□□ 0.16
XRCC1-202ENST00000543982 CXorf49A8MYA2 514 aaPredicted RBP16.05■□□□□ 0.16
XRCC1-202ENST00000543982 CCL22O00626 93 aa16.05■□□□□ 0.16
XRCC1-202ENST00000543982 LEFTY1O75610 366 aa16.05■□□□□ 0.16
XRCC1-202ENST00000543982 TCEA3O75764 348 aa16.05■□□□□ 0.16
XRCC1-202ENST00000543982 POP4O95707 220 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms