RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SLC36A4Q6YBV0 504 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 ARHGEF18Q6ZSZ5 1173 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 TTC7BQ86TV6 843 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 C11orf74Q86VG3 221 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 C12orf50Q8NA57 414 aaPredicted RBP13.74□□□□□ -0.21
SP140-213ENST00000543928 SPATA22Q8NHS9 363 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 ZNF592Q92610 1267 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 RTP4Q96DX8 246 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 FCRL5Q96RD9 977 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 GPR174Q9BXC1 333 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 TDRD1Q9BXT4 1180 aaKnown RBP13.74□□□□□ -0.21
SP140-213ENST00000543928 UBP1Q9NZI7 540 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 PCDHB9Q9Y5E1 797 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 A0A1W2PQ67 120 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 PRR23AA6NEV1 266 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 UPK3BL1B0FP48 263 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 UPK3BL2E5RIL1 263 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 PDE2AO00408 941 aaPredicted RBP13.73□□□□□ -0.21
SP140-213ENST00000543928 PLRG1O43660 514 aaKnown RBP13.73□□□□□ -0.21
SP140-213ENST00000543928 PHF2O75151 1096 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 PMPCBO75439 489 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 PGLSO95336 258 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 MT-CYBP00156 380 aaPredicted RBP13.73□□□□□ -0.21
SP140-213ENST00000543928 CPP00450 1065 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 PRKCGP05129 697 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 CA4P22748 312 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 XPAP23025 273 aaPredicted RBP13.73□□□□□ -0.21
SP140-213ENST00000543928 PSMB4P28070 264 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 TAS2R38P59533 333 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 POLR2LP62875 67 aaKnown RBP13.73□□□□□ -0.21
SP140-213ENST00000543928 SLC14A2Q15849 920 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 UGP2Q16851 508 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 P3H1Q32P28 736 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 PLK5Q496M5 336 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 ARMC12Q5T9G4 340 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 TTC27Q6P3X3 843 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 PRR23BQ6ZRT6 265 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 GSTA5Q7RTV2 222 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 PRUNE1Q86TP1 453 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 DEFB119Q8N690 84 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 CCDC89Q8N998 374 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 RAB7BQ96AH8 199 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 TADA1Q96BN2 335 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 OXNAD1Q96HP4 312 aaPredicted RBP13.73□□□□□ -0.21
SP140-213ENST00000543928 FAM86C1Q9NVL1 165 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 RNF14Q9UBS8 474 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 FAM153AQ9UHL3 310 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 CHKBQ9Y259 395 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 SDK1Q7Z5N4 2213 aa13.73□□□□□ -0.21
SP140-213ENST00000543928 SPAG17Q6Q759 2223 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 TBC1D3DA0A087WVF3 549 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 TBC1D3IA0A087WXS9 549 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 TBC1D3EA0A087X179 549 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 TBC1D3KA0A087X1G2 549 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 TBC1D3FA6NER0 549 aaPredicted RBP13.72□□□□□ -0.21
SP140-213ENST00000543928 LRRC72A6NJI9 287 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 TBC1D3LB9A6J9 549 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 SPINT1O43278 529 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 FZD6O60353 706 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 PDHA1P08559 390 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 TBC1D3HP0C7X1 549 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 ETS1P14921 441 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 ITIH2P19823 946 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 ACTN2P35609 894 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 DEKP35659 375 aaKnown RBP13.72□□□□□ -0.21
SP140-213ENST00000543928 COILP38432 576 aaPredicted RBP13.72□□□□□ -0.21
SP140-213ENST00000543928 SUOXP51687 545 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 PRPSAP1Q14558 356 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 PCSK7Q16549 785 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 PMS2CLQ68D20 193 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 TBC1D3GQ6DHY5 549 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 TBC1D3CQ6IPX1 549 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 CCDC137Q6PK04 289 aaKnown RBP13.72□□□□□ -0.21
SP140-213ENST00000543928 LPCAT2Q7L5N7 544 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 TMEFF1Q8IYR6 380 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 TBC1D3Q8IZP1 549 aaPredicted RBP13.72□□□□□ -0.21
SP140-213ENST00000543928 TAB3Q8N5C8 712 aaPredicted RBP13.72□□□□□ -0.21
SP140-213ENST00000543928 GLIS1Q8NBF1 620 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 OR2T34Q8NGX1 318 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 ATL2Q8NHH9 583 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 PIH1D2Q8WWB5 315 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 GORASP1Q9BQQ3 440 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 DUSP15Q9H1R2 295 aaPredicted RBP13.72□□□□□ -0.21
SP140-213ENST00000543928 C6orf106Q9H6K1 298 aaPredicted RBP13.72□□□□□ -0.21
SP140-213ENST00000543928 PCDH9Q9HC56 1237 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 PCDH12Q9NPG4 1184 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 VPS45Q9NRW7 570 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 GGT7Q9UJ14 662 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 PHTF1Q9UMS5 762 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 ITM2BQ9Y287 266 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 FADS3Q9Y5Q0 445 aa13.72□□□□□ -0.21
SP140-213ENST00000543928 THADAQ6YHU6 1953 aa13.71□□□□□ -0.21
SP140-213ENST00000543928 NEMP1O14524 444 aa13.71□□□□□ -0.21
SP140-213ENST00000543928 AREL1O15033 823 aa13.71□□□□□ -0.21
SP140-213ENST00000543928 AP1G1O43747 822 aa13.71□□□□□ -0.21
SP140-213ENST00000543928 ANXA9O76027 345 aa13.71□□□□□ -0.21
SP140-213ENST00000543928 URI1O94763 535 aaPredicted RBP13.71□□□□□ -0.21
SP140-213ENST00000543928 PCDH8O95206 1070 aa13.71□□□□□ -0.21
SP140-213ENST00000543928 METTL18O95568 372 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms