RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SPRP35270 261 aaPredicted RBP9.4□□□□□ -0.9
GNE-206ENST00000543356 SCNN1BP51168 640 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 RPS6KA3P51812 740 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 LIMK2P53671 638 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 WDR4P57081 412 aaKnown RBP9.4□□□□□ -0.9
GNE-206ENST00000543356 IL9RQ01113 521 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 LRRC14Q15048 493 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 PLEKHG6Q3KR16 790 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 ESRP1Q6NXG1 681 aaKnown RBP9.4□□□□□ -0.9
GNE-206ENST00000543356 NCEH1Q6PIU2 408 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 STRA8Q7Z7C7 330 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 ITFG1Q8TB96 612 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 BCAS4Q8TDM0 211 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 IRF7Q92985 503 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 BHMTQ93088 406 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 CHMP6Q96FZ7 201 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 MAGEB18Q96M61 343 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 NSMCE3Q96MG7 304 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 ZNF317Q96PQ6 595 aaPredicted RBP9.4□□□□□ -0.9
GNE-206ENST00000543356 SH3GL3Q99963 347 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 FAM167BQ9BTA0 163 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 IARS2Q9NSE4 1012 aaKnown RBP9.4□□□□□ -0.9
GNE-206ENST00000543356 ABCB8Q9NUT2 735 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 CLEC4EQ9ULY5 219 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 C2orf16Q68DN1 1984 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 EPOPA6NHQ4 379 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 GOLGA8RI6L899 631 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 TIMM44O43615 452 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 ARNTP27540 789 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 MAGEA12P43365 314 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 CSNK1DP48730 415 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 SEC24CP53992 1094 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 RHOAP61586 193 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 AP1S1P61966 158 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 ACVR1Q04771 509 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 PITRM1Q5JRX3 1037 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 MROH9Q5TGP6 573 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 ARID3BQ8IVW6 561 aaPredicted RBP9.4□□□□□ -0.9
GNE-206ENST00000543356 KIRREL3Q8IZU9 778 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 CELF5Q8N6W0 485 aaKnown RBP9.4□□□□□ -0.9
GNE-206ENST00000543356 ING5Q8WYH8 240 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 EXOC2Q96KP1 924 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 AGAP2Q99490 1192 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 KLF6Q99612 283 aaPredicted RBP9.4□□□□□ -0.9
GNE-206ENST00000543356 PAIP2Q9BPZ3 127 aaKnown RBP9.4□□□□□ -0.9
GNE-206ENST00000543356 SPHK2Q9NRA0 654 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 PLK2Q9NYY3 685 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 SLC2A6Q9UGQ3 507 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 KIF26AQ9ULI4 1882 aaPredicted RBP9.4□□□□□ -0.91
GNE-206ENST00000543356 CHD9Q3L8U1 2897 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 COPEO14579 308 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 LDB2O43679 373 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 MAPK8P45983 427 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 GALNT3Q14435 633 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 DMC1Q14565 340 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 UGP2Q16851 508 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 PREPLQ4J6C6 727 aaPredicted RBP9.39□□□□□ -0.91
GNE-206ENST00000543356 RGS9BPQ6ZS82 235 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 TMEM25Q86YD3 366 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 GABPB2Q8TAK5 448 aaPredicted RBP9.39□□□□□ -0.91
GNE-206ENST00000543356 TCP10LQ8TDR4 215 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 PPP2R3CQ969Q6 453 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 MRPL38Q96DV4 380 aaKnown RBP9.39□□□□□ -0.91
GNE-206ENST00000543356 CCT8L2Q96SF2 557 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 SLC28A3Q9HAS3 691 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 MLXIPLQ9NP71 852 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 INTS6Q9UL03 887 aaKnown RBP9.39□□□□□ -0.91
GNE-206ENST00000543356 FCF1Q9Y324 198 aaKnown RBP9.39□□□□□ -0.91
GNE-206ENST00000543356 RAI2Q9Y5P3 530 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 NDUFAB1O14561 156 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 SLC7A4O43246 635 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 VAPBO95292 243 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 ALDOAP04075 364 aaKnown RBP9.39□□□□□ -0.91
GNE-206ENST00000543356 HLA-FP30511 346 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 CRHR1P34998 444 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 HADHAP40939 763 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 SERPINB8P50452 374 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 CNGA3Q16281 694 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 LVRNQ6Q4G3 990 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 TMC5Q6UXY8 1006 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 TMEM184AQ6ZMB5 413 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 KIAA0408Q6ZU52 694 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 LMNTD2Q8IXW0 634 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 C12orf76Q8N812 135 aaPredicted RBP9.39□□□□□ -0.91
GNE-206ENST00000543356 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.39□□□□□ -0.91
GNE-206ENST00000543356 OR13J1Q8NGT2 312 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 GDAP1Q8TB36 358 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 BRSK1Q8TDC3 778 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 ZNF473Q8WTR7 871 aaKnown RBP9.39□□□□□ -0.91
GNE-206ENST00000543356 BBS2Q9BXC9 721 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 ADGRE3Q9BY15 652 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 SLC2A11Q9BYW1 496 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.39□□□□□ -0.91
GNE-206ENST00000543356 GGT7Q9UJ14 662 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 DOCK6Q96HP0 2047 aa9.39□□□□□ -0.91
GNE-206ENST00000543356 CCDC78A2IDD5 438 aa9.38□□□□□ -0.91
GNE-206ENST00000543356 CCDC85CA6NKD9 419 aa9.38□□□□□ -0.91
GNE-206ENST00000543356 NEDD8-MDP1E9PL57 170 aa9.38□□□□□ -0.91
GNE-206ENST00000543356 TPP1O14773 563 aa9.38□□□□□ -0.91
GNE-206ENST00000543356 MT-CO1P00395 513 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms