RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 SETMARQ53H47 684 aaPredicted RBP18.56■□□□□ 0.56
COPS7A-216ENST00000543170 TCEAL6Q6IPX3 200 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 PRPF39Q86UA1 669 aaKnown RBP18.56■□□□□ 0.56
COPS7A-216ENST00000543170 TFB1MQ8WVM0 346 aaKnown RBP18.56■□□□□ 0.56
COPS7A-216ENST00000543170 TCEAL3Q969E4 200 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 MIR1-1HGQ9H1L0 117 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 EBF2Q9HAK2 575 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 NOD2Q9HC29 1040 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 TM9SF3Q9HD45 589 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.56■□□□□ 0.56
COPS7A-216ENST00000543170 A0A1W2PQU0 124 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 KCNK1O00180 336 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 GJB3O75712 270 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 TJP3O95049 919 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 CFIP05156 583 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 HLA-DQB2P05538 268 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 TIMP2P16035 220 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 AFF3P51826 1226 aaKnown RBP18.55■□□□□ 0.56
COPS7A-216ENST00000543170 LIMK1P53667 647 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 ZBTB17Q13105 803 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 LLGL1Q15334 1064 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 ZNF284Q2VY69 593 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 AASDHQ4L235 1098 aaPredicted RBP18.55■□□□□ 0.56
COPS7A-216ENST00000543170 MEI1Q5TIA1 1274 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 NAPEPLDQ6IQ20 393 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 TTC7BQ86TV6 843 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 ASB12Q8WXK4 309 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 FEM1CQ96JP0 617 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 NSMCE3Q96MG7 304 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 QKIQ96PU8 341 aaKnown RBP eCLIP18.55■□□□□ 0.56
COPS7A-216ENST00000543170 SEMA3CQ99985 751 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 HERPUD2Q9BSE4 406 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 HEMGNQ9BXL5 484 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 ZDHHC5Q9C0B5 715 aa18.55■□□□□ 0.56
COPS7A-216ENST00000543170 SAE1Q9UBE0 346 aaPredicted RBP18.55■□□□□ 0.56
COPS7A-216ENST00000543170 ZFR2Q9UPR6 939 aaKnown RBP18.55■□□□□ 0.56
COPS7A-216ENST00000543170 DOCK9Q9BZ29 2069 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 TP53BP1Q12888 1972 aaPredicted RBP18.54■□□□□ 0.56
COPS7A-216ENST00000543170 ZNF189O75820 626 aaPredicted RBP18.54■□□□□ 0.56
COPS7A-216ENST00000543170 PCDH8O95206 1070 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 XPAP23025 273 aaPredicted RBP18.54■□□□□ 0.56
COPS7A-216ENST00000543170 POLR2LP62875 67 aaKnown RBP18.54■□□□□ 0.56
COPS7A-216ENST00000543170 IRX4P78413 519 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 TEAD4Q15561 434 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 ERAP2Q6P179 960 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 ZSWIM9Q86XI8 627 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 ARRDC2Q8TBH0 407 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 LRRN4Q8WUT4 740 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 VAT1Q99536 393 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 EDEM2Q9BV94 578 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 SLCO1B1Q9Y6L6 691 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 CFAP54Q96N23 3096 aa18.54■□□□□ 0.56
COPS7A-216ENST00000543170 PRAMEF26H0Y7S4 382 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 NEMP1O14524 444 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 ZSCAN12O43309 604 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 JCHAINP01591 159 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 SYPP08247 313 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 CA4P22748 312 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 NFKBIAP25963 317 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 MMP12P39900 470 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 ITKQ08881 620 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 TRAF2Q12933 501 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 KLF1Q13351 362 aaPredicted RBP18.53■□□□□ 0.56
COPS7A-216ENST00000543170 SLC14A2Q15849 920 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 TMEM52BQ4KMG9 183 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 SLC45A4Q5BKX6 768 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 CCDC181Q5TID7 509 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 CNTD1Q8N815 330 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 TTC13Q8NBP0 860 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 TMEM145Q8NBT3 493 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 NETO1Q8TDF5 533 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 HAUS1Q96CS2 278 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 SERAC1Q96JX3 654 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 SLC6A18Q96N87 628 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 CARD9Q9H257 536 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 PCDH12Q9NPG4 1184 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 GGT7Q9UJ14 662 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 ITM2BQ9Y287 266 aa18.53■□□□□ 0.56
COPS7A-216ENST00000543170 CEP250Q9BV73 2442 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 LAMA1P25391 3075 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 TTC24A2A3L6 582 aaPredicted RBP18.52■□□□□ 0.56
COPS7A-216ENST00000543170 CFAP69A5D8W1 941 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 GOLGA6L9A6NEM1 432 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 ARHGAP33O14559 1287 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 RIOK3O14730 519 aaKnown RBP18.52■□□□□ 0.56
COPS7A-216ENST00000543170 VILLO15195 856 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 FZD6O60353 706 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 PGLSO95336 258 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 CPP00450 1065 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 ENGP17813 658 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 HNRNPA2B1P22626 353 aaKnown RBP18.52■□□□□ 0.56
COPS7A-216ENST00000543170 PTPN3P26045 913 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 MAT2AP31153 395 aaKnown RBP18.52■□□□□ 0.56
COPS7A-216ENST00000543170 OTUD4Q01804 1114 aaKnown RBP18.52■□□□□ 0.56
COPS7A-216ENST00000543170 DSC2Q02487 901 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 CCDC173Q0VFZ6 552 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 OVGP1Q12889 678 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 GRIK2Q13002 908 aa18.52■□□□□ 0.56
COPS7A-216ENST00000543170 ZNF211Q13398 564 aaPredicted RBP18.52■□□□□ 0.56
COPS7A-216ENST00000543170 RPS6KA1Q15418 735 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms