RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 USP27XA6NNY8 438 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 C10orf142B7Z368 130 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 ENC1O14682 589 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 AREL1O15033 823 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 RNGTTO60942 597 aaKnown RBP18.93■□□□□ 0.62
VPS33A-205ENST00000541169 PIGNO95427 931 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 FGGP02679 453 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 TUBB4AP04350 444 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 CD27P26842 260 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 METAP1P53582 386 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 WASHC5Q12768 1159 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 POM121L1PQ3SYA9 428 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 SETMARQ53H47 684 aaPredicted RBP18.93■□□□□ 0.62
VPS33A-205ENST00000541169 PEAR1Q5VY43 1037 aaPredicted RBP18.93■□□□□ 0.62
VPS33A-205ENST00000541169 PID1Q7Z2X4 250 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 RASGEF1CQ8N431 466 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 ARRDC2Q8TBH0 407 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 FAM174AQ8TBP5 190 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 ASB12Q8WXK4 309 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 FAM122AQ96E09 287 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 C1QTNF7Q9BXJ2 289 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 GLOD4Q9HC38 313 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 CD93Q9NPY3 652 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 KCTD5Q9NXV2 234 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 FADS3Q9Y5Q0 445 aa18.93■□□□□ 0.62
VPS33A-205ENST00000541169 GOLGA6CA6NDK9 693 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 GOLGA6BA6NDN3 693 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 PRR23AA6NEV1 266 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 FAM47DPA6NHR8 397 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 ANXA9O76027 345 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 PCDH8O95206 1070 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 PGLSO95336 258 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 GOLGA6DP0CG33 693 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 TIMP2P16035 220 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 RBL1P28749 1068 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 ACTN2P35609 894 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 TAS2R38P59533 333 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 LMNB2Q03252 620 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 PRPSAP1Q14558 356 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 LONRF2Q1L5Z9 754 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 CCDC70Q6NSX1 233 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 C4orf22Q6V702 233 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 USP45Q70EL2 814 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 HORMAD1Q86X24 394 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 RAVER1Q8IY67 606 aaKnown RBP18.92■□□□□ 0.62
VPS33A-205ENST00000541169 ACTRT1Q8TDG2 376 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 SKA1Q96BD8 255 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 BIRC7Q96CA5 298 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 FCRL5Q96RD9 977 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 OSBPL9Q96SU4 736 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 NAPGQ99747 312 aaPredicted RBP18.92■□□□□ 0.62
VPS33A-205ENST00000541169 C6orf106Q9H6K1 298 aaPredicted RBP18.92■□□□□ 0.62
VPS33A-205ENST00000541169 GOLGA6AQ9NYA3 693 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 PILRBQ9UKJ0 227 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 DRG1Q9Y295 367 aaKnown RBP18.92■□□□□ 0.62
VPS33A-205ENST00000541169 AAR2Q9Y312 384 aaKnown RBP18.92■□□□□ 0.62
VPS33A-205ENST00000541169 PPIL1Q9Y3C6 166 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 PCDHGC4Q9Y5F7 938 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 RAI2Q9Y5P3 530 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 ANKRD36A6QL64 1941 aa18.92■□□□□ 0.62
VPS33A-205ENST00000541169 A0A1W2PPC4 97 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 C5orf60A6NFR6 353 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 PGRMC1O00264 195 aaKnown RBP18.91■□□□□ 0.62
VPS33A-205ENST00000541169 KCNN4O15554 427 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 LIASO43766 372 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 FSBPO95073 299 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 CPP00450 1065 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 EPOP01588 193 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 ATP1A1P05023 1023 aaKnown RBP18.91■□□□□ 0.62
VPS33A-205ENST00000541169 ITGAVP06756 1048 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 CYP2A6P11509 494 aaPredicted RBP18.91■□□□□ 0.62
VPS33A-205ENST00000541169 PTGER3P43115 390 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 DSC2Q02487 901 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 CREB5Q02930 508 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 P3H1Q32P28 736 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 TMEM52BQ4KMG9 183 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 PAPD7Q5XG87 772 aaKnown RBP18.91■□□□□ 0.62
VPS33A-205ENST00000541169 SLC41A1Q8IVJ1 513 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 RGL4Q8IZJ4 473 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 TADA1Q96BN2 335 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 SPATA13Q96N96 652 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 TDRD1Q9BXT4 1180 aaKnown RBP18.91■□□□□ 0.62
VPS33A-205ENST00000541169 USP29Q9HBJ7 922 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 RNF14Q9UBS8 474 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 FAM153AQ9UHL3 310 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 PCDHB9Q9Y5E1 797 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 ABCA7Q8IZY2 2146 aa18.91■□□□□ 0.62
VPS33A-205ENST00000541169 GOLGA6L10A0A0M3HER8 536 aa18.9■□□□□ 0.62
VPS33A-205ENST00000541169 RIOK3O14730 519 aaKnown RBP18.9■□□□□ 0.62
VPS33A-205ENST00000541169 FZD6O60353 706 aa18.9■□□□□ 0.62
VPS33A-205ENST00000541169 GCATO75600 419 aa18.9■□□□□ 0.62
VPS33A-205ENST00000541169 CXCR5P32302 372 aa18.9■□□□□ 0.62
VPS33A-205ENST00000541169 PLA2G5P39877 138 aa18.9■□□□□ 0.62
VPS33A-205ENST00000541169 MPLP40238 635 aa18.9■□□□□ 0.62
VPS33A-205ENST00000541169 CD86P42081 329 aa18.9■□□□□ 0.62
VPS33A-205ENST00000541169 GRIA4P48058 902 aa18.9■□□□□ 0.62
VPS33A-205ENST00000541169 EPHB1P54762 984 aa18.9■□□□□ 0.62
VPS33A-205ENST00000541169 SKOR1P84550 965 aa18.9■□□□□ 0.62
VPS33A-205ENST00000541169 SGCGQ13326 291 aa18.9■□□□□ 0.62
VPS33A-205ENST00000541169 MPP3Q13368 585 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms