RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 MAGEC1O60732 1142 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 CCNCP24863 283 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 AKT2P31751 481 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 MMP12P39900 470 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 CCT8P50990 548 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 NOVA1P51513 510 aaKnown RBP13.23□□□□□ -0.29
LTBR-208ENST00000541005 VAV2P52735 878 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 ELP6Q0PNE2 266 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 SLC10A2Q12908 348 aaPredicted RBP13.23□□□□□ -0.29
LTBR-208ENST00000541005 UGP2Q16851 508 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 TMEM52BQ4KMG9 183 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 ZFYVE27Q5T4F4 411 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 MARC1Q5VT66 337 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 GCNT7Q6ZNI0 430 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 ABI3BPQ7Z7G0 1075 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 TTC7BQ86TV6 843 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 ZSWIM9Q86XI8 627 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 CAMK1DQ8IU85 385 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 KATNAL2Q8IYT4 538 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 OXR1Q8N573 874 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 NSMCE3Q96MG7 304 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 KLF6Q99612 283 aaPredicted RBP13.23□□□□□ -0.29
LTBR-208ENST00000541005 SLC17A9Q9BYT1 436 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 GDF3Q9NR23 364 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 TM7SF3Q9NS93 570 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 HYOU1Q9Y4L1 999 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 HS3ST3A1Q9Y663 406 aa13.23□□□□□ -0.29
LTBR-208ENST00000541005 ZFC3H1O60293 1989 aaKnown RBP13.22□□□□□ -0.29
LTBR-208ENST00000541005 SCN8AQ9UQD0 1980 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 A0A1B0GTQ1 180 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 A0A1W2PQ67 120 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 MED19A0JLT2 244 aaPredicted RBP13.22□□□□□ -0.29
LTBR-208ENST00000541005 IGLON5A6NGN9 336 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 GOLGA6L6A8MZA4 724 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 H0Y8X5 98 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 NEMP1O14524 444 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 APOL1O14791 398 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 MATN3O15232 486 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 ZFXP17010 805 aaPredicted RBP13.22□□□□□ -0.29
LTBR-208ENST00000541005 CDKN2BP42772 138 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 RXRGP48443 463 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 SCNN1BP51168 640 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 GSDMDP57764 484 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 BCL2L1Q07817 233 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 PPIDQ08752 370 aaKnown RBP13.22□□□□□ -0.29
LTBR-208ENST00000541005 STAT4Q14765 748 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 LRRC73Q5JTD7 316 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 CFAP58Q5T655 872 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 PSAPL1Q6NUJ1 521 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 KYAT3Q6YP21 454 aaKnown RBP13.22□□□□□ -0.29
LTBR-208ENST00000541005 SPATS2Q86XZ4 545 aaKnown RBP13.22□□□□□ -0.29
LTBR-208ENST00000541005 NAXDQ8IW45 347 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 SPC24Q8NBT2 197 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 ACRBPQ8NEB7 543 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 KLK6Q92876 244 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 ZNF830Q96NB3 372 aaPredicted RBP13.22□□□□□ -0.29
LTBR-208ENST00000541005 OLFM3Q96PB7 478 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 ELF4Q99607 663 aaPredicted RBP13.22□□□□□ -0.29
LTBR-208ENST00000541005 LACRTQ9GZZ8 138 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 GOLPH3Q9H4A6 298 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 SLC32A1Q9H598 525 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 PCDH12Q9NPG4 1184 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 ATP8A1Q9Y2Q0 1164 aa13.22□□□□□ -0.29
LTBR-208ENST00000541005 ARHGEF17Q96PE2 2063 aaPredicted RBP13.21□□□□□ -0.29
LTBR-208ENST00000541005 CFAP69A5D8W1 941 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 A6NNZ2 444 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
LTBR-208ENST00000541005 RAD51BO15315 384 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 FLRT2O43155 660 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 CBFA2T3O75081 653 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 MAP3K6O95382 1288 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 ADRB1P08588 477 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 XPAP23025 273 aaPredicted RBP13.21□□□□□ -0.29
LTBR-208ENST00000541005 SGCGQ13326 291 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 AGERQ15109 404 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 SHBQ15464 509 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 ERAP2Q6P179 960 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 MFSD7Q6UXD7 560 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 DAAM2Q86T65 1068 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 TXLNBQ8N3L3 684 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 LRRC57Q8N9N7 239 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 DEFB124Q8NES8 71 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 BAHD1Q8TBE0 780 aaPredicted RBP13.21□□□□□ -0.29
LTBR-208ENST00000541005 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.21□□□□□ -0.29
LTBR-208ENST00000541005 CXorf40AQ8TE69 158 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 CENPTQ96BT3 561 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 KLHDC7BQ96G42 594 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 C1QTNF7Q9BXJ2 289 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 BRD8Q9H0E9 1235 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 NOD2Q9HC29 1040 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 FZD3Q9NPG1 666 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 SCUBE2Q9NQ36 999 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 HAUS2Q9NVX0 235 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 CA5BQ9Y2D0 317 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 DUSP10Q9Y6W6 482 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 ACACBO00763 2458 aa13.21□□□□□ -0.29
LTBR-208ENST00000541005 GIPC1O14908 333 aa13.2□□□□□ -0.3
LTBR-208ENST00000541005 SH3BP5O60239 455 aa13.2□□□□□ -0.3
LTBR-208ENST00000541005 TM7SF2O76062 418 aa13.2□□□□□ -0.3
LTBR-208ENST00000541005 PAK4O96013 591 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms