RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CCNCP24863 283 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 SERPINA4P29622 427 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 SUOXP51687 545 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 CLDN2P57739 230 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 BCL2L1Q07817 233 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 IHHQ14623 411 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 STAT4Q14765 748 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 SHBQ15464 509 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 TMEM52BQ4KMG9 183 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 TIGD7Q6NT04 549 aaPredicted RBP17.04■□□□□ 0.32
CD9-209ENST00000540891 PSAPL1Q6NUJ1 521 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 BRAT1Q6PJG6 821 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 NPNTQ6UXI9 565 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 DBX2Q6ZNG2 339 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 DAAM2Q86T65 1068 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 ZSCAN30Q86W11 494 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 RFX6Q8HWS3 928 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 DEFB124Q8NES8 71 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 NSMCE1Q8WV22 266 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 OLFM3Q96PB7 478 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 NOD2Q9HC29 1040 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 NT5MQ9NPB1 228 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 PCDH12Q9NPG4 1184 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 TRIM10Q9UDY6 481 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 SHROOM3Q8TF72 1996 aa17.04■□□□□ 0.32
CD9-209ENST00000540891 A0A1B0GTQ1 180 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 RIOK3O14730 519 aaKnown RBP17.03■□□□□ 0.32
CD9-209ENST00000540891 HTRA2O43464 458 aaPredicted RBP17.03■□□□□ 0.32
CD9-209ENST00000540891 SH3BP5O60239 455 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 MMP20O60882 483 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 KRT10P13645 584 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 MX2P20592 715 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 AKT2P31751 481 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 NOVA1P51513 510 aaKnown RBP17.03■□□□□ 0.32
CD9-209ENST00000540891 SEMG2Q02383 582 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 ADCY2Q08462 1091 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 PPIDQ08752 370 aaKnown RBP17.03■□□□□ 0.32
CD9-209ENST00000540891 TRAF2Q12933 501 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 LLGL1Q15334 1064 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 SLC45A4Q5BKX6 768 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 ALG1LQ6GMV1 187 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 KDM7AQ6ZMT4 941 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 SPOCD1Q6ZMY3 1216 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 ABI3BPQ7Z7G0 1075 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 KATNAL2Q8IYT4 538 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 BBS5Q8N3I7 341 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 LRRC57Q8N9N7 239 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.03■□□□□ 0.32
CD9-209ENST00000540891 ASB12Q8WXK4 309 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 SPOCK2Q92563 424 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 SKA1Q96BD8 255 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 CALR3Q96L12 384 aaKnown RBP17.03■□□□□ 0.32
CD9-209ENST00000540891 BMFQ96LC9 184 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 CAMK1GQ96NX5 476 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 LENG8Q96PV6 779 aaPredicted RBP17.03■□□□□ 0.32
CD9-209ENST00000540891 LGMNQ99538 433 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 ELF4Q99607 663 aaPredicted RBP17.03■□□□□ 0.32
CD9-209ENST00000540891 SCUBE2Q9NQ36 999 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 ATP8A1Q9Y2Q0 1164 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 PCDHGC4Q9Y5F7 938 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 PCDHGB2Q9Y5G2 931 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 HEY1Q9Y5J3 304 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 TRPM6Q9BX84 2022 aa17.03■□□□□ 0.32
CD9-209ENST00000540891 TP53BP1Q12888 1972 aaPredicted RBP17.02■□□□□ 0.32
CD9-209ENST00000540891 ANKRD36A6QL64 1941 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 KNL1Q8NG31 2342 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.02■□□□□ 0.32
CD9-209ENST00000540891 GRID2IPA4D2P6 1211 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 POM121BA6NF01 834 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 SOCS5O75159 536 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 XPAP23025 273 aaPredicted RBP17.02■□□□□ 0.32
CD9-209ENST00000540891 MMP12P39900 470 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 GSDMDP57764 484 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 DYNLT1P63172 113 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 IL9RQ01113 521 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 ELP6Q0PNE2 266 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 OVGP1Q12889 678 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 RALGDSQ12967 914 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 RALGPS1Q5JS13 557 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 FAM182AQ5T1J6 154 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 CFAP58Q5T655 872 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 KIAA1328Q86T90 577 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 CCDC13Q8IYE1 715 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 OR13H1Q8NG92 308 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 CXorf40AQ8TE69 158 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 KLHDC7BQ96G42 594 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 SEMA3CQ99985 751 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 WRAP53Q9BUR4 548 aaKnown RBP17.02■□□□□ 0.32
CD9-209ENST00000540891 MAK16Q9BXY0 300 aaKnown RBP17.02■□□□□ 0.32
CD9-209ENST00000540891 GDF3Q9NR23 364 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 GPR27Q9NS67 375 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 RBM22Q9NW64 420 aaKnown RBP eCLIP17.02■□□□□ 0.32
CD9-209ENST00000540891 HS3ST3A1Q9Y663 406 aa17.02■□□□□ 0.32
CD9-209ENST00000540891 hCG_1818297A0A087WSY0 165 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 CBFA2T3O75081 653 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 TM7SF2O76062 418 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 HLA-DQB2P05538 268 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 THEGLP0DJG4 465 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 CEACAM1P13688 526 aa17.01■□□□□ 0.31
CD9-209ENST00000540891 CCNB1P14635 433 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms