RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 PLPP6Q8IY26 295 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 ATPAF2Q8N5M1 289 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 ZNF366Q8N895 744 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 ATP11CQ8NB49 1132 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 MDGA1Q8NFP4 955 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 OR2T3Q8NH03 318 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 MAML1Q92585 1016 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 MRGPRX1Q96LB2 322 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 VAT1Q99536 393 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 IL12RB2Q99665 862 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 GORASP1Q9BQQ3 440 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 MKRN2Q9H000 416 aaKnown RBP10.73□□□□□ -0.69
ATL3-204ENST00000540699 RSPH9Q9H1X1 276 aaPredicted RBP10.73□□□□□ -0.69
ATL3-204ENST00000540699 ETNK1Q9HBU6 452 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 RAB6BQ9NRW1 208 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 NCDNQ9UBB6 729 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 ATP8A1Q9Y2Q0 1164 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 NFS1Q9Y697 457 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 THADAQ6YHU6 1953 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 TPRP12270 2363 aaKnown RBP10.73□□□□□ -0.69
ATL3-204ENST00000540699 J3KR12 359 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 DFFAO00273 331 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 AXIN1O15169 862 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 MATN3O15232 486 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 EIF3HO15372 352 aaKnown RBP eCLIP10.72□□□□□ -0.69
ATL3-204ENST00000540699 SYNCRIPO60506 623 aaKnown RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 STK10O94804 968 aaKnown RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 IGLV3-19P01714 112 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 NDUFV2P19404 249 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 FNTBP49356 437 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 PMS2P54278 862 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 ZBTB16Q05516 673 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 ELAVL3Q14576 367 aaKnown RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 RSPO4Q2I0M5 234 aaPredicted RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 PARP6Q2NL67 630 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 UBAP2Q5T6F2 1119 aaKnown RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 FAXCQ5TGI0 409 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 ALS2CLQ60I27 953 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 ANO7Q6IWH7 933 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 ARHGEF18Q6ZSZ5 1173 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 CEP128Q6ZU80 1094 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 ZNF534Q76KX8 674 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 TAB3Q8N5C8 712 aaPredicted RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 PCDH20Q8N6Y1 951 aaKnown RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 MCUQ8NE86 351 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 OR2A12Q8NGT7 310 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 VOPP1Q96AW1 172 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 ZNF419Q96HQ0 510 aaPredicted RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 TEKT5Q96M29 485 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 ZNF599Q96NL3 588 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 CNTNAP3BQ96NU0 1288 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 ZIM3Q96PE6 472 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 FAM129BQ96TA1 746 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 FERMT1Q9BQL6 677 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 WDR83Q9BRX9 315 aaKnown RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 CEP41Q9BYV8 373 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 CNTNAP3Q9BZ76 1288 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 PABPC3Q9H361 631 aaKnown RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 CDC42EP4Q9H3Q1 356 aaKnown RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 MTG2Q9H4K7 406 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 EIF2B3Q9NR50 452 aaKnown RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 IPO11Q9UI26 975 aaKnown RBP10.72□□□□□ -0.69
ATL3-204ENST00000540699 TRHDEQ9UKU6 1024 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 ACTL7AQ9Y615 435 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 EPG5Q9HCE0 2579 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 GON4LQ3T8J9 2241 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 SDK1Q7Z5N4 2213 aa10.72□□□□□ -0.69
ATL3-204ENST00000540699 RIPK2O43353 540 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 TMCC1O94876 653 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 GSRP00390 522 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 NUDT17P0C025 328 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 PSMB4P28070 264 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 CNR2P34972 360 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 MAGEA3P43357 314 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 RPS14P62263 151 aaKnown RBP10.71□□□□□ -0.69
ATL3-204ENST00000540699 RFTN1Q14699 578 aaPredicted RBP10.71□□□□□ -0.69
ATL3-204ENST00000540699 CYTH1Q15438 398 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 MSS51Q4VC12 460 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 FNBP1LQ5T0N5 605 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 TMCO4Q5TGY1 634 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 TIGD7Q6NT04 549 aaPredicted RBP10.71□□□□□ -0.69
ATL3-204ENST00000540699 LRIG3Q6UXM1 1119 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 Q6ZVU0 165 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 TRMT10CQ7L0Y3 403 aaKnown RBP10.71□□□□□ -0.69
ATL3-204ENST00000540699 CCDC25Q86WR0 208 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 TMPRSS6Q8IU80 811 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 TEX26Q8N6G2 289 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 CNTD1Q8N815 330 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 HMGB4Q8WW32 186 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 SERPINB12Q96P63 405 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 RBM15Q96T37 977 aaKnown RBP eCLIP10.71□□□□□ -0.69
ATL3-204ENST00000540699 SH3GL2Q99962 352 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 FRMD8Q9BZ67 464 aaPredicted RBP10.71□□□□□ -0.69
ATL3-204ENST00000540699 GBA3Q9H227 469 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 NINJ2Q9NZG7 142 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 SEPT10Q9P0V9 454 aa10.71□□□□□ -0.69
ATL3-204ENST00000540699 USP36Q9P275 1121 aaKnown RBP10.71□□□□□ -0.69
ATL3-204ENST00000540699 KLHL8Q9P2G9 620 aaPredicted RBP10.71□□□□□ -0.69
ATL3-204ENST00000540699 UBA2Q9UBT2 640 aaPredicted RBP10.71□□□□□ -0.69
ATL3-204ENST00000540699 SCML1Q9UN30 329 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms