RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 C3orf30Q96M34 536 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 UBE2OQ9C0C9 1292 aaKnown RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 MRPL46Q9H2W6 279 aaKnown RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 EFCAB1Q9HAE3 211 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 UTP6Q9NYH9 597 aaKnown RBP14.23□□□□□ -0.13
INO80E-203ENST00000540562 PSMD13Q9UNM6 376 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 SLC27A5Q9Y2P5 690 aa14.23□□□□□ -0.13
INO80E-203ENST00000540562 CABYRO75952 493 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 CRYBB1P53674 252 aaPredicted RBP14.22□□□□□ -0.13
INO80E-203ENST00000540562 PSME3P61289 254 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 IHHQ14623 411 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 GSTA3Q16772 222 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 NADK2Q4G0N4 442 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 OVOS1Q6IE37 1185 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 GDF6Q6KF10 455 aaPredicted RBP14.22□□□□□ -0.13
INO80E-203ENST00000540562 CYS1Q717R9 158 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 CUZD1Q86UP6 607 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 METTL25Q8N6Q8 603 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 MRPL1Q9BYD6 325 aaKnown RBP14.22□□□□□ -0.13
INO80E-203ENST00000540562 VCX3BQ9H321 246 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 ZBTB26Q9HCK0 441 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 ARL5AQ9Y689 179 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 SBF1O95248 1867 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 A0A1B0GTL3 188 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 MBLAC1A4D2B0 266 aaPredicted RBP14.22□□□□□ -0.13
INO80E-203ENST00000540562 A8MT66 165 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 ZNF487B1APH4 448 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 GPR39O43194 453 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 CELF2O95319 508 aaKnown RBP14.22□□□□□ -0.13
INO80E-203ENST00000540562 SLC7A2P52569 658 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 CDKN2DP55273 166 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 FOXA1P55317 472 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 PIGGQ5H8A4 983 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 KCTD13Q8WZ19 329 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 HMCESQ96FZ2 354 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 TBATAQ96M53 351 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 ADAM28Q9UKQ2 775 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 TIMM22Q9Y584 194 aa14.22□□□□□ -0.13
INO80E-203ENST00000540562 PRORSD1PA6NEY8 169 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 UBDO15205 165 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 AKAP10O43572 662 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 FOXD2O60548 495 aaPredicted RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 TADA2AO75478 443 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 ALOX15P16050 662 aaPredicted RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 RPL34P49207 117 aaKnown RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 NSUN2Q08J23 767 aaKnown RBP eCLIP14.21□□□□□ -0.13
INO80E-203ENST00000540562 PFKFB4Q16877 469 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 VPS26BQ4G0F5 336 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 CMPK2Q5EBM0 449 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 STXBP5Q5T5C0 1151 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 UGT2A3Q6UWM9 527 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 ATAD1Q8NBU5 361 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 CEP70Q8NHQ1 597 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 LPGAT1Q92604 370 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 JADE3Q92613 823 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 TMIGD2Q96BF3 282 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 SIKE1Q9BRV8 207 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 SOX17Q9H6I2 414 aaPredicted RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 COQ10BQ9H8M1 238 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 SARS2Q9NP81 518 aaKnown RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 TRHDEQ9UKU6 1024 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 TCAF1Q9Y4C2 921 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 TMEM114B3SHH9 223 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 UBFD1O14562 309 aaKnown RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 GRIA3P42263 894 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 MAGEA12P43365 314 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 ARCN1P48444 511 aaKnown RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 LHX1P48742 406 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 APLP1P51693 650 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 CSE1LP55060 971 aaKnown RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 RAP1GAP2Q684P5 730 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 SPATA2LQ8IUW3 424 aaPredicted RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 OR13C4Q8NGS5 318 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 RP9Q8TA86 221 aaKnown RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 HMGCLL1Q8TB92 370 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 GPR78Q96P69 363 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 SLC29A1Q99808 456 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 DNAI2Q9GZS0 605 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 STN1Q9H668 368 aaKnown RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 UXTQ9UBK9 157 aaPredicted RBP14.21□□□□□ -0.13
INO80E-203ENST00000540562 GTF2IRD1Q9UHL9 959 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 NOD1Q9Y239 953 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 HS3ST4Q9Y661 456 aa14.21□□□□□ -0.13
INO80E-203ENST00000540562 XIRP2A4UGR9 3374 aa14.21□□□□□ -0.14
INO80E-203ENST00000540562 E9PAM4 449 aa14.21□□□□□ -0.14
INO80E-203ENST00000540562 PLOD2O00469 737 aa14.21□□□□□ -0.14
INO80E-203ENST00000540562 B4GALT3O60512 393 aa14.21□□□□□ -0.14
INO80E-203ENST00000540562 TOMM70O94826 608 aa14.21□□□□□ -0.14
INO80E-203ENST00000540562 MYCP01106 439 aaPredicted RBP14.21□□□□□ -0.14
INO80E-203ENST00000540562 CHRNA1P02708 482 aa14.21□□□□□ -0.14
INO80E-203ENST00000540562 TRIM32Q13049 653 aa14.21□□□□□ -0.14
INO80E-203ENST00000540562 TMEM207Q6UWW9 146 aa14.21□□□□□ -0.14
INO80E-203ENST00000540562 ADAM2Q99965 735 aa14.21□□□□□ -0.14
INO80E-203ENST00000540562 KIFC1Q9BW19 673 aa14.21□□□□□ -0.14
INO80E-203ENST00000540562 DMAP1Q9NPF5 467 aaPredicted RBP14.21□□□□□ -0.14
INO80E-203ENST00000540562 PLXNA1Q9UIW2 1896 aa14.2□□□□□ -0.14
INO80E-203ENST00000540562 RBM47A0AV96 593 aaKnown RBP14.2□□□□□ -0.14
INO80E-203ENST00000540562 UBXN8O00124 270 aa14.2□□□□□ -0.14
INO80E-203ENST00000540562 PSMD12O00232 456 aaPredicted RBP14.2□□□□□ -0.14
INO80E-203ENST00000540562 LINC00032P0C843 101 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms