RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 CCDC112Q8NEF3 446 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 DENND6BQ8NEG7 585 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 OR2I1PQ8NGU4 316 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 RNF25Q96BH1 459 aaPredicted RBP13.52□□□□□ -0.25
CCDC130-202ENST00000540216 ECHDC3Q96DC8 303 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 C1QTNF7Q9BXJ2 289 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 SLC17A9Q9BYT1 436 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 BRD8Q9H0E9 1235 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 SLC32A1Q9H598 525 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 ERVMER34-1Q9H9K5 563 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 SCUBE2Q9NQ36 999 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 GDF3Q9NR23 364 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 SALL4Q9UJQ4 1053 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 FNDC3AQ9Y2H6 1198 aaKnown RBP13.52□□□□□ -0.25
CCDC130-202ENST00000540216 TRPM6Q9BX84 2022 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 KNL1Q8NG31 2342 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 SHROOM3Q8TF72 1996 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 WNT9AO14904 365 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 PCDHGA12O60330 932 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 NEBLO76041 1014 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 ZRANB2O95218 330 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC130-202ENST00000540216 CEACAM1P13688 526 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 CD59P13987 128 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 CCNB1P14635 433 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 NFKBIAP25963 317 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 NOVA1P51513 510 aaKnown RBP13.51□□□□□ -0.25
CCDC130-202ENST00000540216 NXPH1P58417 271 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 PPIDQ08752 370 aaKnown RBP13.51□□□□□ -0.25
CCDC130-202ENST00000540216 SLC10A2Q12908 348 aaPredicted RBP13.51□□□□□ -0.25
CCDC130-202ENST00000540216 PDK1Q15118 436 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 TMEM52BQ4KMG9 183 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 TFDP3Q5H9I0 405 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 PPM1JQ5JR12 505 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 ALG1LQ6GMV1 187 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 MFSD7Q6UXD7 560 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 ABI3BPQ7Z7G0 1075 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 PIP4P1Q86T03 277 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 RFX6Q8HWS3 928 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 CCDC13Q8IYE1 715 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 RCOR2Q8IZ40 523 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 PGBD5Q8N414 524 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 PAF1Q8N7H5 531 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 EXD1Q8NHP7 514 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 KIAA1524Q8TCG1 905 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 CXorf40AQ8TE69 158 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 RBM41Q96IZ5 413 aaKnown RBP13.51□□□□□ -0.25
CCDC130-202ENST00000540216 LENG8Q96PV6 779 aaPredicted RBP13.51□□□□□ -0.25
CCDC130-202ENST00000540216 POLR1EQ9GZS1 481 aaKnown RBP13.51□□□□□ -0.25
CCDC130-202ENST00000540216 LACRTQ9GZZ8 138 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 GOLPH3Q9H4A6 298 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 TM7SF3Q9NS93 570 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 ITM2BQ9Y287 266 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 ATP8A1Q9Y2Q0 1164 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 HEY1Q9Y5J3 304 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 HS3ST3A1Q9Y663 406 aa13.51□□□□□ -0.25
CCDC130-202ENST00000540216 CCDC66A2RUB6 948 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 CFAP69A5D8W1 941 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 IGLON5A6NGN9 336 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 A6NNZ2 444 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 TRAFD1O14545 582 aaPredicted RBP13.5□□□□□ -0.25
CCDC130-202ENST00000540216 PPP1R12AO14974 1030 aaPredicted RBP13.5□□□□□ -0.25
CCDC130-202ENST00000540216 FLRT2O43155 660 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 HTRA2O43464 458 aaPredicted RBP13.5□□□□□ -0.25
CCDC130-202ENST00000540216 KCNK5O95279 499 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 MAP3K6O95382 1288 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 CTNNA1P35221 906 aaKnown RBP13.5□□□□□ -0.25
CCDC130-202ENST00000540216 MMP12P39900 470 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 NR2C2P49116 596 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 ARRB1P49407 418 aaPredicted RBP13.5□□□□□ -0.25
CCDC130-202ENST00000540216 COPS2P61201 443 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 MAXP61244 160 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 FGL2Q14314 439 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 SUZ12Q15022 739 aaKnown RBP13.5□□□□□ -0.25
CCDC130-202ENST00000540216 PPP2R5EQ16537 467 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 INAVAQ3KP66 663 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 LRRC73Q5JTD7 316 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 KYAT3Q6YP21 454 aaKnown RBP13.5□□□□□ -0.25
CCDC130-202ENST00000540216 SPOCD1Q6ZMY3 1216 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 DCP2Q8IU60 420 aaKnown RBP13.5□□□□□ -0.25
CCDC130-202ENST00000540216 SYCE1Q8N0S2 351 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 CCNYQ8ND76 341 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 KLK6Q92876 244 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 KLHDC7BQ96G42 594 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 OLFM3Q96PB7 478 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 ELF4Q99607 663 aaPredicted RBP13.5□□□□□ -0.25
CCDC130-202ENST00000540216 IL21RQ9HBE5 538 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 NOD2Q9HC29 1040 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 NT5MQ9NPB1 228 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 PCDH12Q9NPG4 1184 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 GGT7Q9UJ14 662 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 DUSP10Q9Y6W6 482 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 TP53BP1Q12888 1972 aaPredicted RBP13.5□□□□□ -0.25
CCDC130-202ENST00000540216 ANKRD36A6QL64 1941 aa13.5□□□□□ -0.25
CCDC130-202ENST00000540216 A0A1B0GTQ1 180 aa13.49□□□□□ -0.25
CCDC130-202ENST00000540216 H0Y8X5 98 aa13.49□□□□□ -0.25
CCDC130-202ENST00000540216 RIOK3O14730 519 aaKnown RBP13.49□□□□□ -0.25
CCDC130-202ENST00000540216 FPGTO14772 594 aa13.49□□□□□ -0.25
CCDC130-202ENST00000540216 ARHGAP6O43182 974 aa13.49□□□□□ -0.25
CCDC130-202ENST00000540216 TM7SF2O76062 418 aa13.49□□□□□ -0.25
CCDC130-202ENST00000540216 PAK4O96013 591 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms