RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 IL36AQ9UHA7 158 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 NFU1Q9UMS0 254 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CHKBQ9Y259 395 aa19.1■□□□□ 0.65
TNFRSF1A-213ENST00000540022 LOC285095A0A1B0GVY8 99 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 TRAFD1O14545 582 aaPredicted RBP19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 NDC80O14777 642 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PRLP01236 227 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 PDHA1P08559 390 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MYBL2P10244 700 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CDK18Q07002 472 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 CAMK2GQ13555 558 aaPredicted RBP19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 GAS6Q14393 721 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ELAVL3Q14576 367 aaKnown RBP19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ARSIQ5FYB1 569 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 NAPEPLDQ6IQ20 393 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 SDE2Q6IQ49 451 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 KIAA1211LQ6NV74 962 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 WDR93Q6P2C0 686 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 RANBP10Q6VN20 620 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 MCUQ8NE86 351 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 OR8D1Q8WZ84 308 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 NELL2Q99435 816 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 TBL1YQ9BQ87 522 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 FSD1LQ9BXM9 530 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 ATP13A3Q9H7F0 1226 aa19.09■□□□□ 0.65
TNFRSF1A-213ENST00000540022 SMAPO00193 183 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 HTRA2O43464 458 aaPredicted RBP19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 FZD6O60353 706 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 LEFTY1O75610 366 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 UGT2B4P06133 528 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 TNFRSF8P28908 595 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SERPINA4P29622 427 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 CHRNA4P43681 627 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 CAV1Q03135 178 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 MTM1Q13496 603 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 LRRC32Q14392 662 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 GRM3Q14832 879 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 DENND5AQ6IQ26 1287 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 CAND1Q86VP6 1230 aaKnown RBP19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 OR52K1Q8NGK4 314 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 PDCD6IPQ8WUM4 868 aaKnown RBP19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 IFT43Q96FT9 208 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 FEM1CQ96JP0 617 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SUV39H2Q9H5I1 410 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 PIH1D1Q9NWS0 290 aaKnown RBP19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SARDHQ9UL12 918 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SIT1Q9Y3P8 196 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 PCDHB9Q9Y5E1 797 aa19.08■□□□□ 0.64
TNFRSF1A-213ENST00000540022 FANCMQ8IYD8 2048 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 A0A1W2PQF6 199 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 H0Y858 1186 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 ALOX15BO15296 676 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SYNCRIPO60506 623 aaKnown RBP19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SOCS5O75159 536 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 EPOP01588 193 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 ATXN1LP0C7T5 689 aaKnown RBP19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 HOXB2P14652 356 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 HSF5Q4G112 596 aaPredicted RBP19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 GDPD4Q6W3E5 623 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 CCNI2Q6ZMN8 369 aaPredicted RBP19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 LINC00523Q86TU6 105 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 GSPT2Q8IYD1 628 aaKnown RBP19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SYNPOQ8N3V7 929 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SLC25A41Q8N5S1 370 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 LRIG1Q96JA1 1093 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 ZNF641Q96N77 438 aaPredicted RBP19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 KLHL32Q96NJ5 620 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SERPINB12Q96P63 405 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 PHOX2BQ99453 314 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 FAM129AQ9BZQ8 928 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 CD248Q9HCU0 757 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 CASS4Q9NQ75 786 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 C2orf42Q9NWW7 574 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 DLGAP2Q9P1A6 1054 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 PPM1HQ9ULR3 514 aa19.07■□□□□ 0.64
TNFRSF1A-213ENST00000540022 AVILO75366 819 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 PGLSO95336 258 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 NDST3O95803 873 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 CA4P22748 312 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 HOXD11P31277 338 aaPredicted RBP19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SARNPP82979 210 aaKnown RBP19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 GALNT3Q14435 633 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SLC1A5Q15758 541 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 SIRPB2Q5JXA9 342 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 EOGTQ5NDL2 527 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 FNBP1LQ5T0N5 605 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 ARMC12Q5T9G4 340 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 PPP1R21Q6ZMI0 780 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 ZSWIM9Q86XI8 627 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 ZCCHC9Q8N567 271 aaKnown RBP19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 EIF1ADQ8N9N8 165 aaKnown RBP19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 DTWD2Q8NBA8 298 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 TMIEQ8NEW7 156 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 LPCAT1Q8NF37 534 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 CLDN23Q96B33 292 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 ECHDC3Q96DC8 303 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 RAB21Q9UL25 225 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 MMP17Q9ULZ9 603 aa19.06■□□□□ 0.64
TNFRSF1A-213ENST00000540022 PRNPP04156 253 aa19.05■□□□□ 0.64
TNFRSF1A-213ENST00000540022 METAP1P53582 386 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms