RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ERVK-10P10266 1014 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 KRT4P19013 534 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 GP5P40197 560 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 SCNN1BP51168 640 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 MSLNQ13421 630 aaPredicted RBP17.03■□□□□ 0.32
COPS3-212ENST00000539941 GRTP1Q5TC63 336 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 KIAA0930Q6ICG6 404 aaPredicted RBP17.03■□□□□ 0.32
COPS3-212ENST00000539941 TMC5Q6UXY8 1006 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 PACS1Q6VY07 963 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 TMEM184AQ6ZMB5 413 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 TIFABQ6ZNK6 161 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 KDELC2Q7Z4H8 507 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 KCNMB4Q86W47 210 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 C12orf76Q8N812 135 aaPredicted RBP17.03■□□□□ 0.32
COPS3-212ENST00000539941 VN1R2Q8NFZ6 395 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 ITFG1Q8TB96 612 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 ATXN2LQ8WWM7 1075 aaKnown RBP17.03■□□□□ 0.32
COPS3-212ENST00000539941 ING5Q8WYH8 240 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 PEX13Q92968 403 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 TRIB3Q96RU7 358 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 CCDC134Q9H6E4 229 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 SPHK2Q9NRA0 654 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 TREX1Q9NSU2 369 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 ETAA1Q9NY74 926 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 PLK2Q9NYY3 685 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 LHX3Q9UBR4 397 aa17.03■□□□□ 0.32
COPS3-212ENST00000539941 TTC24A2A3L6 582 aaPredicted RBP17.02■□□□□ 0.32
COPS3-212ENST00000539941 TYROBPO43914 113 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 UGT1A9O60656 530 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 NEFHP12036 1026 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 CA4P22748 312 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 RGRP47804 291 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 RHOAP61586 193 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 SLC18A2Q05940 514 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 ADGRE1Q14246 886 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 DMC1Q14565 340 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 NAIF1Q69YI7 327 aaPredicted RBP17.02■□□□□ 0.32
COPS3-212ENST00000539941 TTC19Q6DKK2 380 aaPredicted RBP17.02■□□□□ 0.32
COPS3-212ENST00000539941 LINGO4Q6UY18 593 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 APCDD1Q8J025 514 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 UGT1A7Q9HAW7 530 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 UGT1A10Q9HAW8 530 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 UGT1A8Q9HAW9 530 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 C20orf96Q9NUD7 363 aaPredicted RBP17.02■□□□□ 0.32
COPS3-212ENST00000539941 ABCB8Q9NUT2 735 aa17.02■□□□□ 0.32
COPS3-212ENST00000539941 CSNK1DP48730 415 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 NUMBP49757 651 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 CSE1LP55060 971 aaKnown RBP17.01■□□□□ 0.31
COPS3-212ENST00000539941 AP1S1P61966 158 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 MPP2Q14168 576 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 TEDDM1Q5T9Z0 273 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 TMEM25Q86YD3 366 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 APLFQ8IW19 511 aaPredicted RBP17.01■□□□□ 0.31
COPS3-212ENST00000539941 CNTN4Q8IWV2 1026 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 C4orf33Q8N1A6 199 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 BANPQ8N9N5 519 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 GABPB2Q8TAK5 448 aaPredicted RBP17.01■□□□□ 0.31
COPS3-212ENST00000539941 BBS2Q9BXC9 721 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 SLC2A11Q9BYW1 496 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 RIMKLBQ9ULI2 386 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 CLEC4EQ9ULY5 219 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 MYLKQ15746 1914 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 MROH6A6NGR9 719 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 TM9SF1O15321 606 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 SIN3BO75182 1162 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 GJB3O75712 270 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 DNAJC8O75937 253 aaPredicted RBP17.01■□□□□ 0.31
COPS3-212ENST00000539941 ZWINTO95229 277 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 FSHRP23945 695 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 CD70P32970 193 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 MAPK8P45983 427 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 SEPT6Q14141 434 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 HSP90AA5PQ58FG0 334 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 TSTD2Q5T7W7 516 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 NCEH1Q6PIU2 408 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 SH2D5Q6ZV89 423 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 GPR149Q86SP6 731 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 DENND1AQ8TEH3 1009 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 ZNF778Q96MU6 729 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 CCT8L2Q96SF2 557 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 TDRD1Q9BXT4 1180 aaKnown RBP17.01■□□□□ 0.31
COPS3-212ENST00000539941 NSUN3Q9H649 340 aaKnown RBP17.01■□□□□ 0.31
COPS3-212ENST00000539941 MKS1Q9NXB0 559 aa17.01■□□□□ 0.31
COPS3-212ENST00000539941 C2orf16Q68DN1 1984 aa17■□□□□ 0.31
COPS3-212ENST00000539941 NEDD8-MDP1E9PL57 170 aa17■□□□□ 0.31
COPS3-212ENST00000539941 SPAG7O75391 227 aa17■□□□□ 0.31
COPS3-212ENST00000539941 HLA-FP30511 346 aa17■□□□□ 0.31
COPS3-212ENST00000539941 SPRP35270 261 aaPredicted RBP17■□□□□ 0.31
COPS3-212ENST00000539941 CCNFP41002 786 aa17■□□□□ 0.31
COPS3-212ENST00000539941 ARCN1P48444 511 aaKnown RBP17■□□□□ 0.31
COPS3-212ENST00000539941 SULT2A1Q06520 285 aa17■□□□□ 0.31
COPS3-212ENST00000539941 CBX2Q14781 532 aaPredicted RBP17■□□□□ 0.31
COPS3-212ENST00000539941 NAA25Q14CX7 972 aa17■□□□□ 0.31
COPS3-212ENST00000539941 PITRM1Q5JRX3 1037 aa17■□□□□ 0.31
COPS3-212ENST00000539941 ESRP1Q6NXG1 681 aaKnown RBP17■□□□□ 0.31
COPS3-212ENST00000539941 NPAS3Q8IXF0 933 aa17■□□□□ 0.31
COPS3-212ENST00000539941 ADGRG2Q8IZP9 1017 aa17■□□□□ 0.31
COPS3-212ENST00000539941 EFHBQ8N7U6 833 aa17■□□□□ 0.31
COPS3-212ENST00000539941 ANKRD42Q8N9B4 389 aa17■□□□□ 0.31
COPS3-212ENST00000539941 ACMSDQ8TDX5 336 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms