RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 RCOR3Q9P2K3 495 aaPredicted RBP6.53□□□□□ -1.36
LSAMP-207ENST00000539563 ZNHIT2Q9UHR6 403 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 USP20Q9Y2K6 914 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 PCDHB1Q9Y5F3 818 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 BCL9LQ86UU0 1499 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 MYH13Q9UKX3 1938 aa6.53□□□□□ -1.36
LSAMP-207ENST00000539563 TMEM191CA6NGB0 347 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 LRRC14BA6NHZ5 514 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 B4GALT4O60513 344 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 GOT1P17174 413 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 PRAMEF19Q5SWL8 479 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 TTC23Q5W5X9 447 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 ZNF57Q68EA5 555 aaPredicted RBP6.52□□□□□ -1.36
LSAMP-207ENST00000539563 TRIM40Q6P9F5 258 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 TTC7BQ86TV6 843 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 ENKURQ8TC29 256 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 TIFAQ96CG3 184 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 PAIP1Q9H074 479 aaKnown RBP6.52□□□□□ -1.36
LSAMP-207ENST00000539563 CLEC4MQ9H2X3 399 aaPredicted RBP6.52□□□□□ -1.36
LSAMP-207ENST00000539563 DNAJC5Q9H3Z4 198 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 TAS2R14Q9NYV8 317 aa6.52□□□□□ -1.36
LSAMP-207ENST00000539563 FSBPO95073 299 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 IDO1P14902 403 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 HTR1BP28222 390 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 HNMTP50135 292 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 NEDD8Q15843 81 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 VSTM1Q6UX27 236 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 KIAA0408Q6ZU52 694 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 BBS12Q6ZW61 710 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 YTHDF3Q7Z739 585 aaKnown RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 PEG10Q86TG7 708 aaKnown RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 POU5F2Q8N7G0 328 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 TSEN2Q8NCE0 465 aaKnown RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 SPACA7Q96KW9 195 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 SEMA3CQ99985 751 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 TTLL2Q9BWV7 592 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 SEMA4BQ9NPR2 832 aaPredicted RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 GPSM3Q9Y4H4 160 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 IRGMA1A4Y4 181 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 TRIM43BA6NCK2 446 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 TRIM38O00635 465 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 ASNA1O43681 348 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 SNX3O60493 162 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 GABRB2P47870 512 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 ENPEPQ07075 957 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 TRIM25Q14258 630 aaKnown RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 IL17AQ16552 155 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 PARP15Q460N3 678 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 DUPD1Q68J44 220 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 MZT2BQ6NZ67 158 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 AADACL2Q6P093 401 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 RGL4Q8IZJ4 473 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 LNX1Q8TBB1 728 aaPredicted RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 FERD3LQ96RJ6 166 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 GINS4Q9BRT9 223 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 C3orf18Q9UK00 162 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 PHLPP1O60346 1717 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 LYPLA2O95372 231 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 NAGLUP54802 743 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 C21orf59P57076 290 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 PTSQ03393 145 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 HSPA14Q0VDF9 509 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 KLHL17Q6TDP4 642 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 CLVS1Q8IUQ0 354 aaPredicted RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 STYXQ8WUJ0 223 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 ZNF607Q96SK3 696 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 C6orf62Q9GZU0 229 aaPredicted RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 PRDM12Q9H4Q4 367 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 ZNF624Q9P2J8 865 aaPredicted RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 CHURC1-FNTBB4DL54 471 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 TGDSO95455 350 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 PSMG1O95456 288 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 NUDT17P0C025 328 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 IL12RB1P42701 662 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 PFKPQ01813 784 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 ABRAXAS1Q6UWZ7 409 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 FAM220AQ7Z4H9 259 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 IRF2BP2Q7Z5L9 587 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 PTGR2Q8N8N7 351 aaPredicted RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 BAP1Q92560 729 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 CYLDQ9NQC7 956 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 TMPRSS4Q9NRS4 437 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 CRNNQ9UBG3 495 aaPredicted RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 FKTNO75072 461 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 FGRP09769 529 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 PCSK2P16519 638 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 ABL2P42684 1182 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 XKR6Q5GH73 641 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 CYP2R1Q6VVX0 501 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 B3GNT6Q6ZMB0 384 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 APTXQ7Z2E3 356 aaKnown RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 MYDGFQ969H8 173 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 TRIM63Q969Q1 353 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 TEFMQ96QE5 360 aaKnown RBP6.52□□□□□ -1.37
LSAMP-207ENST00000539563 TRMOQ9BU70 441 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 MFSD1Q9H3U5 465 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 SOHLH2Q9NX45 425 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 CLDN5O00501 218 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 ULK1O75385 1050 aa6.52□□□□□ -1.37
LSAMP-207ENST00000539563 MMP3P08254 477 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms