RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 FKBP6O75344 327 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 ATXN1LP0C7T5 689 aaKnown RBP18.06■□□□□ 0.48
GNE-204ENST00000539208 LAMB3Q13751 1172 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 LBRQ14739 615 aaKnown RBP18.06■□□□□ 0.48
GNE-204ENST00000539208 GPNMBQ14956 572 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 RSPO2Q6UXX9 243 aaPredicted RBP18.06■□□□□ 0.48
GNE-204ENST00000539208 CILP2Q8IUL8 1156 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 RAET1EQ8TD07 263 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 CCDC126Q96EE4 140 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 ZNF599Q96NL3 588 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 SEPT5Q99719 369 aaPredicted RBP18.06■□□□□ 0.48
GNE-204ENST00000539208 CFHR5Q9BXR6 569 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 NMRK1Q9NWW6 199 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 NCKIPSDQ9NZQ3 722 aa18.06■□□□□ 0.48
GNE-204ENST00000539208 UXTQ9UBK9 157 aaPredicted RBP18.06■□□□□ 0.48
GNE-204ENST00000539208 AURKAO14965 403 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 EPOP01588 193 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 OR1E1P30953 314 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 ACVR1Q04771 509 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 ZRSR2Q15696 482 aaKnown RBP18.05■□□□□ 0.48
GNE-204ENST00000539208 MUM1Q2TAK8 710 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 LSM12Q3MHD2 195 aaKnown RBP18.05■□□□□ 0.48
GNE-204ENST00000539208 RBM20Q5T481 1227 aaKnown RBP18.05■□□□□ 0.48
GNE-204ENST00000539208 AGAP9Q5VTM2 703 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 NADSYN1Q6IA69 706 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 AAGABQ6PD74 315 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 FRMD7Q6ZUT3 714 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 ACAD11Q709F0 780 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 ZNF354CQ86Y25 554 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 DBF4BQ8NFT6 615 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 CEP295NLQ96MC4 621 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 CDK5RAP1Q96SZ6 601 aaKnown RBP18.05■□□□□ 0.48
GNE-204ENST00000539208 MYCBPQ99417 103 aaPredicted RBP18.05■□□□□ 0.48
GNE-204ENST00000539208 TMEM175Q9BSA9 504 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 TTLL2Q9BWV7 592 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 SEZ6LQ9BYH1 1024 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 POLR1EQ9GZS1 481 aaKnown RBP18.05■□□□□ 0.48
GNE-204ENST00000539208 PHF24Q9UPV7 400 aa18.05■□□□□ 0.48
GNE-204ENST00000539208 LIN7AO14910 233 aaPredicted RBP18.04■□□□□ 0.48
GNE-204ENST00000539208 HMBSP08397 361 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 THRAP10827 490 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 ITGAXP20702 1163 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 TACR2P21452 398 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 SLC26A3P40879 764 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 CCR10P46092 362 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 SESN3P58005 492 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 AP2B1P63010 937 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 BFSP2Q13515 415 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 ZNF789Q5FWF6 425 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 TECRLQ5HYJ1 363 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 RALGPS1Q5JS13 557 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 ANKS3Q6ZW76 656 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 CD99L2Q8TCZ2 262 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 AGR3Q8TD06 166 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 DTX3LQ8TDB6 740 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 SCG3Q8WXD2 468 aaKnown RBP18.04■□□□□ 0.48
GNE-204ENST00000539208 MOCOSQ96EN8 888 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 FEM1CQ96JP0 617 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 UBXN10Q96LJ8 280 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 OLFM1Q99784 485 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 SSX2IPQ9Y2D8 614 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 LDB2O43679 373 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 TLR5O60602 858 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 RBP1P09455 135 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 LTA4HP09960 611 aaKnown RBP18.04■□□□□ 0.48
GNE-204ENST00000539208 HLA-DPA1P20036 260 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 PFKPQ01813 784 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 NSUN2Q08J23 767 aaKnown RBP eCLIP18.04■□□□□ 0.48
GNE-204ENST00000539208 RTP2Q5QGT7 225 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 ALG1LQ6GMV1 187 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 CRIPAKQ8N1N5 446 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 SPATA6LQ8N4H0 392 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 KDM1BQ8NB78 822 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 TXNDC5Q8NBS9 432 aaKnown RBP18.04■□□□□ 0.48
GNE-204ENST00000539208 PPFIBP2Q8ND30 876 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 ZNF385DQ9H6B1 395 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 WDR55Q9H6Y2 383 aaPredicted RBP18.04■□□□□ 0.48
GNE-204ENST00000539208 CCSER2Q9H7U1 834 aa18.04■□□□□ 0.48
GNE-204ENST00000539208 LOC100653049A0A140TA62 436 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 HOXA2O43364 376 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 AOC2O75106 756 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 KRT34O76011 436 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 S1PR4O95977 384 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 ANPEPP15144 967 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 DUSP4Q13115 394 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 ACAP2Q15057 778 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 HECTD2Q5U5R9 776 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 KLC3Q6P597 504 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 ADGRG6Q86SQ4 1221 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 SETD3Q86TU7 594 aaPredicted RBP18.03■□□□□ 0.48
GNE-204ENST00000539208 LENG8Q96PV6 779 aaPredicted RBP18.03■□□□□ 0.48
GNE-204ENST00000539208 MRPL9Q9BYD2 267 aaKnown RBP18.03■□□□□ 0.48
GNE-204ENST00000539208 CXorf56Q9H5V9 222 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 PDFQ9HBH1 243 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 CDH22Q9UJ99 828 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 LRFN2Q9ULH4 789 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 RIMKLBQ9ULI2 386 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 CDYLQ9Y232 598 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 VWA7Q9Y334 891 aa18.03■□□□□ 0.48
GNE-204ENST00000539208 GOLGA8QA0A0J9YX86 632 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms