RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 CNPY3Q9BT09 278 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 WRAP53Q9BUR4 548 aaKnown RBP12.65□□□□□ -0.38
VAMP1-206ENST00000538970 CPEB1Q9BZB8 566 aaKnown RBP12.65□□□□□ -0.38
VAMP1-206ENST00000538970 CATSPERBQ9H7T0 1116 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 PDFQ9HBH1 243 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 ASCL3Q9NQ33 180 aa12.65□□□□□ -0.38
VAMP1-206ENST00000538970 PTPRQQ9UMZ3 2332 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 TEX51A0A1B0GUA7 166 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 A0A1W2PNU3 283 aaPredicted RBP12.64□□□□□ -0.39
VAMP1-206ENST00000538970 TSPAN11A1L157 253 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 LMO7DNF2Z398 122 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 PIGNO95427 931 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 EIF4A3P38919 411 aaKnown RBP12.64□□□□□ -0.39
VAMP1-206ENST00000538970 SUOXP51687 545 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 ADKP55263 362 aaKnown RBP12.64□□□□□ -0.39
VAMP1-206ENST00000538970 ERVPABLB-1P60509 514 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 OGDHQ02218 1023 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 UBXN1Q04323 297 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 ELP6Q0PNE2 266 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 C1orf61Q13536 156 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 IRF4Q15306 451 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 CYTH1Q15438 398 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 TMEM52BQ4KMG9 183 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 PERM1Q5SV97 790 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 IGF2-ASQ6U949 168 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 CRTC1Q6UUV9 634 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 APTXQ7Z2E3 356 aaKnown RBP12.64□□□□□ -0.39
VAMP1-206ENST00000538970 GPR155Q7Z3F1 870 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 DNAAF5Q86Y56 855 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 SLC35F3Q8IY50 421 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 NCAPGQ9BPX3 1015 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 SLC13A1Q9BZW2 595 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 CLPBQ9H078 707 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 HSD3B7Q9H2F3 369 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 CLMPQ9H6B4 373 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 LRRC19Q9H756 370 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 ANO10Q9NW15 660 aa12.64□□□□□ -0.39
VAMP1-206ENST00000538970 UBA2Q9UBT2 640 aaPredicted RBP12.64□□□□□ -0.39
VAMP1-206ENST00000538970 MGAQ8IWI9 3026 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 LRRC10BA6NIK2 292 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 MUSKO15146 869 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 TCEA3O75764 348 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 ANXA6P08133 673 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 CELA2BP08218 269 aaPredicted RBP12.63□□□□□ -0.39
VAMP1-206ENST00000538970 C6P13671 934 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 TSHRP16473 764 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 XPAP23025 273 aaPredicted RBP12.63□□□□□ -0.39
VAMP1-206ENST00000538970 HTR7P34969 479 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 RPIAP49247 311 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 TPI1P60174 286 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 CXADRP78310 365 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 PPARDQ03181 441 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 NCAPHQ15003 741 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 LRRC14Q15048 493 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 STX1AQ16623 288 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 UGP2Q16851 508 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 WSCD2Q2TBF2 565 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 C3orf38Q5JPI3 329 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 ACAD10Q6JQN1 1059 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 DCUN1D2Q6PH85 259 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 SASS6Q6UVJ0 657 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 RBM44Q6ZP01 1051 aaKnown RBP12.63□□□□□ -0.39
VAMP1-206ENST00000538970 MCOLN2Q8IZK6 566 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 TPCN2Q8NHX9 752 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 HCAR2Q8TDS4 363 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 GLMNQ92990 594 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 GRAMD1AQ96CP6 724 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 ATXN7L3BQ96GX2 97 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 NAF1Q96HR8 494 aaKnown RBP12.63□□□□□ -0.39
VAMP1-206ENST00000538970 SYT11Q9BT88 431 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 PCDH12Q9NPG4 1184 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 THSD1Q9NS62 852 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 SATB2Q9UPW6 733 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 COQ6Q9Y2Z9 468 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 ENTPD2Q9Y5L3 495 aa12.63□□□□□ -0.39
VAMP1-206ENST00000538970 TDRD6O60522 2096 aaKnown RBP12.63□□□□□ -0.39
VAMP1-206ENST00000538970 J3KR12 359 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 CASC3O15234 703 aaKnown RBP12.62□□□□□ -0.39
VAMP1-206ENST00000538970 YY2O15391 372 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 PRAMEF11O60813 436 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 FERP16591 822 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 MMP12P39900 470 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 PEX5P50542 639 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 NDST2P52849 883 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 PDX1P52945 283 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 TMPRSS3P57727 454 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 GRM3Q14832 879 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 AGERQ15109 404 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 ALG11Q2TAA5 492 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 FAXCQ5TGI0 409 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 ZSWIM9Q86XI8 627 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 FSTL5Q8N475 847 aaPredicted RBP12.62□□□□□ -0.39
VAMP1-206ENST00000538970 KCNE4Q8WWG9 221 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 NAT6Q93015 286 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 CELF6Q96J87 481 aaKnown RBP12.62□□□□□ -0.39
VAMP1-206ENST00000538970 VCPIP1Q96JH7 1222 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 TUBGCP5Q96RT8 1024 aa12.62□□□□□ -0.39
VAMP1-206ENST00000538970 CCDC3Q9BQI4 270 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms