RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 SEL1L3Q68CR1 1132 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 SPOCD1Q6ZMY3 1216 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 ZNF662Q6ZS27 426 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 KANSL1Q7Z3B3 1105 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 CAMK1DQ8IU85 385 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 EXD1Q8NHP7 514 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 BAHD1Q8TBE0 780 aaPredicted RBP13.84□□□□□ -0.19
CD9-208ENST00000538834 ARRDC2Q8TBH0 407 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 FAM174AQ8TBP5 190 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 KRT35Q92764 455 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 CENPTQ96BT3 561 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 SERAC1Q96JX3 654 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 CINPQ9BW66 212 aaPredicted RBP13.84□□□□□ -0.19
CD9-208ENST00000538834 SLC17A9Q9BYT1 436 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 IL21RQ9HBE5 538 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 EFR3BQ9Y2G0 817 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 ADGRG1Q9Y653 693 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 ASXL3Q9C0F0 2248 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 hCG_1818297A0A087WSY0 165 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.83□□□□□ -0.2
CD9-208ENST00000538834 DCDC2BA2VCK2 349 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 RAD51BO15315 384 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 PCDHGA12O60330 932 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 DFNA5O60443 496 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 CBFA2T3O75081 653 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 ZFXP17010 805 aaPredicted RBP13.83□□□□□ -0.2
CD9-208ENST00000538834 GM2AP17900 193 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 MX2P20592 715 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 HNRNPA2B1P22626 353 aaKnown RBP13.83□□□□□ -0.2
CD9-208ENST00000538834 MAT2AP31153 395 aaKnown RBP13.83□□□□□ -0.2
CD9-208ENST00000538834 PTPN7P35236 360 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 MMP12P39900 470 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 MMP13P45452 471 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 NXPH1P58417 271 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 IFI35P80217 286 aaPredicted RBP13.83□□□□□ -0.2
CD9-208ENST00000538834 RALGDSQ12967 914 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 TEAD4Q15561 434 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 PPP2R5EQ16537 467 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 TIGD7Q6NT04 549 aaPredicted RBP13.83□□□□□ -0.2
CD9-208ENST00000538834 LAYNQ6UX15 382 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 GCNT7Q6ZNI0 430 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 TTC7BQ86TV6 843 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 NT5DC3Q86UY8 548 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 RCOR2Q8IZ40 523 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 RYBPQ8N488 228 aaPredicted RBP13.83□□□□□ -0.2
CD9-208ENST00000538834 CNTD1Q8N815 330 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 DENND6BQ8NEG7 585 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 SNX19Q92543 992 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 RNF25Q96BH1 459 aaPredicted RBP13.83□□□□□ -0.2
CD9-208ENST00000538834 TADA1Q96BN2 335 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 GAREM1Q9H706 876 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 ATP13A3Q9H7F0 1226 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 NOD2Q9HC29 1040 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 ITM2BQ9Y287 266 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 FNDC3AQ9Y2H6 1198 aaKnown RBP13.83□□□□□ -0.2
CD9-208ENST00000538834 MYLKQ15746 1914 aa13.83□□□□□ -0.2
CD9-208ENST00000538834 A0A1B0GTQ1 180 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 A0A1W2PQ67 120 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 TTC24A2A3L6 582 aaPredicted RBP13.82□□□□□ -0.2
CD9-208ENST00000538834 IGLON5A6NGN9 336 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 H0Y8X5 98 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 TLR4O00206 839 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 SPOPO43791 374 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 OPHN1O60890 802 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 PCDH8O95206 1070 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 MAP3K6O95382 1288 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 CER1O95813 267 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 PRLP01236 227 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 KRT1P04264 644 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 MMP2P08253 660 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 CCNB1P14635 433 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 CES1P23141 567 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 SERPINA4P29622 427 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 NR2C2P49116 596 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 SCNN1BP51168 640 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 COPS2P61201 443 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 TRAF2Q12933 501 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 TFDP3Q5H9I0 405 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 NPNTQ6UXI9 565 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 DAAM2Q86T65 1068 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 LRRC8AQ8IWT6 810 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 LGMNQ99538 433 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 HERPUD2Q9BSE4 406 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 BRD8Q9H0E9 1235 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 PCDH12Q9NPG4 1184 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 TRIM10Q9UDY6 481 aa13.82□□□□□ -0.2
CD9-208ENST00000538834 RP1P56715 2156 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 ZNF106Q9H2Y7 1883 aaKnown RBP13.81□□□□□ -0.2
CD9-208ENST00000538834 POM121BA6NF01 834 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 APOL1O14791 398 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 SLC31A1O15431 190 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 ZRANB2O95218 330 aaKnown RBP eCLIP13.81□□□□□ -0.2
CD9-208ENST00000538834 KCNK5O95279 499 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 PAK4O96013 591 aaPredicted RBP13.81□□□□□ -0.2
CD9-208ENST00000538834 KRT10P13645 584 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 CEACAM1P13688 526 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 PRLRP16471 622 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 PFN3P60673 137 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 MAXP61244 160 aa13.81□□□□□ -0.2
CD9-208ENST00000538834 CCZ1BP86790 482 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms