RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 TNS4Q8IZW8 715 aa14.92□□□□□ -0.02
ATL3-203ENST00000538786 SCUBE2Q9NQ36 999 aa14.92□□□□□ -0.02
ATL3-203ENST00000538786 TXLNGQ9NUQ3 528 aa14.92□□□□□ -0.02
ATL3-203ENST00000538786 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.92□□□□□ -0.02
ATL3-203ENST00000538786 MID2Q9UJV3 735 aa14.92□□□□□ -0.02
ATL3-203ENST00000538786 LSM7Q9UK45 103 aaKnown RBP14.92□□□□□ -0.02
ATL3-203ENST00000538786 ACOT9Q9Y305 439 aa14.92□□□□□ -0.02
ATL3-203ENST00000538786 CHD5Q8TDI0 1954 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 G3V2L1 256 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 DNAJC6O75061 913 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 ZMPSTE24O75844 475 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 ATP5HO75947 161 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 UNC5CO95185 931 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 LUC7L3O95232 432 aaKnown RBP14.91□□□□□ -0.02
ATL3-203ENST00000538786 RALBP11234 206 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 SLC1A6P48664 564 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 ARSDP51689 593 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 PRAMEP78395 509 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 ARF5P84085 180 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 FPGSQ05932 587 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 FSCBQ5H9T9 825 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 MTDHQ86UE4 582 aaKnown RBP14.91□□□□□ -0.02
ATL3-203ENST00000538786 CILP2Q8IUL8 1156 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 HS6ST3Q8IZP7 471 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 ELMOD1Q8N336 334 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 MAB21L3Q8N8X9 362 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 KREMEN2Q8NCW0 462 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 OR6Y1Q8NGX8 325 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 RDH11Q8TC12 318 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 BLOC1S5Q8TDH9 187 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 HDAC10Q969S8 669 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 ELMO2Q96JJ3 720 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 NUDCD1Q96RS6 583 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 SIKE1Q9BRV8 207 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 EMILIN2Q9BXX0 1053 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 TASP1Q9H6P5 420 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.91□□□□□ -0.02
ATL3-203ENST00000538786 HEY2Q9UBP5 337 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 PRKAG2Q9UGJ0 569 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 ZFP69BQ9UJL9 534 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 IRAK3Q9Y616 596 aa14.91□□□□□ -0.02
ATL3-203ENST00000538786 KIAA1671Q9BY89 1806 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 SCAMP3O14828 347 aaKnown RBP14.9□□□□□ -0.02
ATL3-203ENST00000538786 CKMP06732 381 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 CDC25CP30307 473 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 CLCN5P51795 746 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 LBX1P52954 281 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 NSUN2Q08J23 767 aaKnown RBP eCLIP14.9□□□□□ -0.02
ATL3-203ENST00000538786 ILF2Q12905 390 aaKnown RBP14.9□□□□□ -0.02
ATL3-203ENST00000538786 HTR3DQ70Z44 454 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 CLNKQ7Z7G1 428 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 CEP97Q8IW35 865 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 GPATCH11Q8N954 259 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 OR6P1Q8NGX9 317 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 SREK1Q8WXA9 508 aaKnown RBP14.9□□□□□ -0.02
ATL3-203ENST00000538786 BADQ92934 168 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 EXOC2Q96KP1 924 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 TCF25Q9BQ70 676 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 FEM1AQ9BSK4 669 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 SLC40A1Q9NP59 571 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 FBXO6Q9NRD1 293 aaPredicted RBP14.9□□□□□ -0.02
ATL3-203ENST00000538786 CXXC1Q9P0U4 656 aaPredicted RBP14.9□□□□□ -0.02
ATL3-203ENST00000538786 LZTS1Q9Y250 596 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 ZNF510Q9Y2H8 683 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 KCTD3Q9Y597 815 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 OR51B4Q9Y5P0 310 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 ARL5AQ9Y689 179 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 MYLKQ15746 1914 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 A0A087X1B8 175 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 TRAV19A0A0A6YYK7 116 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 AURKAO14965 403 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 ITM2AO43736 263 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 CD160O95971 181 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 PFKLP17858 780 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 MZF1P28698 734 aaPredicted RBP14.9□□□□□ -0.02
ATL3-203ENST00000538786 AVPR1AP37288 418 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 CDH18Q13634 790 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 ITGA9Q13797 1035 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 INO80DQ53TQ3 878 aaPredicted RBP14.9□□□□□ -0.02
ATL3-203ENST00000538786 CNSTQ6PJW8 725 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 ASRGL1Q7L266 308 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 PTAR1Q7Z6K3 402 aaPredicted RBP14.9□□□□□ -0.02
ATL3-203ENST00000538786 CENPLQ8N0S6 344 aaPredicted RBP14.9□□□□□ -0.02
ATL3-203ENST00000538786 SP7Q8TDD2 431 aaPredicted RBP14.9□□□□□ -0.02
ATL3-203ENST00000538786 KCTD4Q8WVF5 259 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 SKA1Q96BD8 255 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 NSMCE3Q96MG7 304 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 GCNAQ96QF7 691 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 RAD9AQ99638 391 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 OMDQ99983 421 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 TDRD1Q9BXT4 1180 aaKnown RBP14.9□□□□□ -0.02
ATL3-203ENST00000538786 VPS28Q9UK41 221 aa14.9□□□□□ -0.02
ATL3-203ENST00000538786 PTPRSQ13332 1948 aa14.89□□□□□ -0.03
ATL3-203ENST00000538786 KIAA0100Q14667 2235 aaKnown RBP14.89□□□□□ -0.03
ATL3-203ENST00000538786 PLXNA4Q9HCM2 1894 aa14.89□□□□□ -0.03
ATL3-203ENST00000538786 SNAP91O60641 907 aa14.89□□□□□ -0.03
ATL3-203ENST00000538786 TRIM13O60858 407 aa14.89□□□□□ -0.03
ATL3-203ENST00000538786 H2AFYO75367 372 aaKnown RBP14.89□□□□□ -0.03
ATL3-203ENST00000538786 LYPLA1O75608 230 aaPredicted RBP14.89□□□□□ -0.03
ATL3-203ENST00000538786 RPP40O75818 363 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms