RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 NT5MQ9NPB1 228 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 ENTPD7Q9NQZ7 604 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 GMPR2Q9P2T1 348 aaKnown RBP12.05□□□□□ -0.48
CPNE8-203ENST00000538596 IPO11Q9UI26 975 aaKnown RBP12.05□□□□□ -0.48
CPNE8-203ENST00000538596 AP4B1Q9Y6B7 739 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 FNDC1Q4ZHG4 1894 aaPredicted RBP12.05□□□□□ -0.48
CPNE8-203ENST00000538596 NPHS1O60500 1241 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 TADA2AO75478 443 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 BCAS2O75934 225 aaPredicted RBP12.05□□□□□ -0.48
CPNE8-203ENST00000538596 PIM1P11309 404 aaPredicted RBP12.05□□□□□ -0.48
CPNE8-203ENST00000538596 ATP5F1P24539 256 aaPredicted RBP12.05□□□□□ -0.48
CPNE8-203ENST00000538596 YWHAQP27348 245 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 CCR1P32246 355 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 GRIK1P39086 918 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 ZNF135P52742 658 aaPredicted RBP12.05□□□□□ -0.48
CPNE8-203ENST00000538596 TECRLQ5HYJ1 363 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 SPRYD7Q5W111 196 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 IYDQ6PHW0 289 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 PIM3Q86V86 326 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 PELI3Q8N2H9 469 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 CEP70Q8NHQ1 597 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 PDCD6IPQ8WUM4 868 aaKnown RBP12.05□□□□□ -0.48
CPNE8-203ENST00000538596 ZFAND2BQ8WV99 257 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 KCTD3Q9Y597 815 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 PCDHGA7Q9Y5G6 932 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 TRPV2Q9Y5S1 764 aa12.05□□□□□ -0.48
CPNE8-203ENST00000538596 A0A1W2PQH9 124 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 FBP2O00757 339 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 UBFD1O14562 309 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 SNUPNO95149 360 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 CSPG5O95196 566 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 ATP6V1B1P15313 513 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 DNAJB2P25686 324 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 CD52P31358 61 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 CD86P42081 329 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 RAB27AP51159 221 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 ARSDP51689 593 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PSME3P61289 254 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 SATB1Q01826 763 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 C11orf91Q3C1V1 193 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 AGKQ53H12 422 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 RARS2Q5T160 578 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 KIAA0930Q6ICG6 404 aaPredicted RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 OVOS1Q6IE37 1185 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 TMEM207Q6UWW9 146 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PIWIL4Q7Z3Z4 852 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 SETD3Q86TU7 594 aaPredicted RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 CUZD1Q86UP6 607 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 NMD3Q96D46 503 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 HAPLN3Q96S86 360 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 SLC39A3Q9BRY0 314 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 CATSPERBQ9H7T0 1116 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 FBRSL1Q9HCM7 1045 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 VPS28Q9UK41 221 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 MIA3Q5JRA6 1907 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 A0A1B0GTW7 788 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 CELF2O95319 508 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PABPC4LP0CB38 370 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 HAPLN1P10915 354 aaPredicted RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 FGFR3P22607 806 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 HK2P52789 917 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 CDKN2DP55273 166 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 POU4F1Q01851 419 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 ZNF33AQ06730 810 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 SLC10A7Q0GE19 358 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PTPRCAPQ14761 206 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 HERC3Q15034 1050 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 NRF1Q16656 503 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PIK3R6Q5UE93 754 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 TAF2Q6P1X5 1199 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 METTL23Q86XA0 190 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 TICAM1Q8IUC6 712 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 SCN4BQ8IWT1 228 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 MARVELD2Q8N4S9 558 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 OR13J1Q8NGT2 312 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 NAT14Q8WUY8 206 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 EXT2Q93063 718 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PABPC5Q96DU9 382 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 KATNAL1Q9BW62 490 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 MRPL1Q9BYD6 325 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 A0A087X1B8 175 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PRSS51A0A1B0GVH4 220 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 TRPC5OSA6NMA1 111 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 KIF3CO14782 793 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 SLC22A2O15244 555 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 DENRO43583 198 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 CNTN5O94779 1100 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 IPO13O94829 963 aaKnown RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PEX11BO96011 259 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 CHRM1P11229 460 aaPredicted RBP12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PAMP19021 973 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 HOXC13P31276 330 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 GPR15P49685 360 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 MYBPC1Q00872 1141 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 DSC2Q02487 901 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 FAM83EQ2M2I3 478 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 PITRM1Q5JRX3 1037 aa12.04□□□□□ -0.48
CPNE8-203ENST00000538596 GNASQ5JWF2 1037 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms