RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 SLC10A7Q0GE19 358 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 MSLNQ13421 630 aaPredicted RBP6.68□□□□□ -1.34
USP28-206ENST00000538224 HERC3Q15034 1050 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 ACAP2Q15057 778 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 MAPRE2Q15555 327 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 DLG2Q15700 870 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 ALFQ53S48 1182 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 TECRLQ5HYJ1 363 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 RALGPS1Q5JS13 557 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 SIRPB2Q5JXA9 342 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 RTP2Q5QGT7 225 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 HECTD3Q5T447 861 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 SDHAF4Q5VUM1 108 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 RNF19BQ6ZMZ0 732 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 TMC7Q7Z402 723 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 SDCCAG8Q86SQ7 713 aaPredicted RBP6.68□□□□□ -1.34
USP28-206ENST00000538224 TREML1Q86YW5 311 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 CILP2Q8IUL8 1156 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 HERC6Q8IVU3 1022 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 DENND6AQ8IWF6 608 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 ULK2Q8IYT8 1036 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 TNS4Q8IZW8 715 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 CENPLQ8N0S6 344 aaPredicted RBP6.68□□□□□ -1.34
USP28-206ENST00000538224 LGI2Q8N0V4 545 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 FSTL5Q8N475 847 aaPredicted RBP6.68□□□□□ -1.34
USP28-206ENST00000538224 SLC25A41Q8N5S1 370 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 ZNF781Q8N8C0 355 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 PPFIBP2Q8ND30 876 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 RBM15BQ8NDT2 890 aaKnown RBP6.68□□□□□ -1.34
USP28-206ENST00000538224 FBXO22Q8NEZ5 403 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 GPR150Q8NGU9 434 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 ARRDC2Q8TBH0 407 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 KCTD4Q8WVF5 259 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 USP13Q92995 863 aaPredicted RBP6.68□□□□□ -1.34
USP28-206ENST00000538224 IGSF8Q969P0 613 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 TRMT2BQ96GJ1 504 aaKnown RBP6.68□□□□□ -1.34
USP28-206ENST00000538224 ZNF419Q96HQ0 510 aaPredicted RBP6.68□□□□□ -1.34
USP28-206ENST00000538224 CNDP1Q96KN2 507 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 MGME1Q9BQP7 344 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 EBF4Q9BQW3 602 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 RTKNQ9BST9 563 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 CINPQ9BW66 212 aaPredicted RBP6.68□□□□□ -1.34
USP28-206ENST00000538224 CWH43Q9H720 699 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 COG4Q9H9E3 785 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 PDFQ9HBH1 243 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 TCF7L2Q9NQB0 619 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 PNPOQ9NVS9 261 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 ZNF358Q9NW07 568 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 SAGE1Q9NXZ1 904 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP28-206ENST00000538224 TRPM5Q9NZQ8 1165 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 HACD3Q9P035 362 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 UBA2Q9UBT2 640 aaPredicted RBP6.68□□□□□ -1.34
USP28-206ENST00000538224 PRPF19Q9UMS4 504 aaKnown RBP6.68□□□□□ -1.34
USP28-206ENST00000538224 ARHGAP26Q9UNA1 814 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 PLA2G4CQ9UP65 541 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 CDYLQ9Y232 598 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 NUMBLQ9Y6R0 609 aa6.68□□□□□ -1.34
USP28-206ENST00000538224 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.67□□□□□ -1.34
USP28-206ENST00000538224 ILVBLA1L0T0 632 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 GOLGA8CPA6NN73 597 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 TARM1B6A8C7 271 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 GOLGA8TH3BQL2 631 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 ZNF195O14628 629 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 KIF3CO14782 793 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 LIN7AO14910 233 aaPredicted RBP6.67□□□□□ -1.34
USP28-206ENST00000538224 KDELR3O43731 214 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 CCNT2O60583 730 aaKnown RBP6.67□□□□□ -1.34
USP28-206ENST00000538224 SMIM24O75264 130 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 PIGNO95427 931 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 GLP2RO95838 553 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 RHOCP08134 193 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 MMP2P08253 660 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 HMBSP08397 361 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 ATXN1LP0C7T5 689 aaKnown RBP6.67□□□□□ -1.34
USP28-206ENST00000538224 THRAP10827 490 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 ATF6P18850 670 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 GNAZP19086 355 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 NCF2P19878 526 aaPredicted RBP6.67□□□□□ -1.34
USP28-206ENST00000538224 SAT1P21673 171 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 GLDCP23378 1020 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 PPARGP37231 505 aaPredicted RBP6.67□□□□□ -1.34
USP28-206ENST00000538224 ALDH1A3P47895 512 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 TAS2R39P59534 338 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 NFKB2Q00653 900 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 CAP1Q01518 475 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 DSC2Q02487 901 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 SLC34A1Q06495 639 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 DUSP4Q13115 394 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 ZNF177Q13360 481 aaPredicted RBP6.67□□□□□ -1.34
USP28-206ENST00000538224 CTBP1Q13363 440 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 PLD1Q13393 1074 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 UBAP2LQ14157 1087 aaKnown RBP6.67□□□□□ -1.34
USP28-206ENST00000538224 KPNB1Q14974 876 aaKnown RBP6.67□□□□□ -1.34
USP28-206ENST00000538224 NAA25Q14CX7 972 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 TAF11Q15544 211 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 SMAD1Q15797 465 aaKnown RBP6.67□□□□□ -1.34
USP28-206ENST00000538224 TAF12Q16514 161 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 MUM1Q2TAK8 710 aa6.67□□□□□ -1.34
USP28-206ENST00000538224 HSF5Q4G112 596 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms