RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ZFP37Q9Y6Q3 630 aaPredicted RBP15.77■□□□□ 0.12
MKS1-204ENST00000537529 SLCO1B7G3V0H7 640 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 AURKAO14965 403 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 CIB2O75838 187 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 SNUPNO95149 360 aaKnown RBP15.77■□□□□ 0.11
MKS1-204ENST00000537529 PIGNO95427 931 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 CHRNGP07510 517 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 SERPINF2P08697 491 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 TPBGLP0DKB5 382 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 NCF2P19878 526 aaPredicted RBP15.77■□□□□ 0.11
MKS1-204ENST00000537529 HOXD9P28356 352 aaPredicted RBP15.77■□□□□ 0.11
MKS1-204ENST00000537529 RPL14P50914 215 aaKnown RBP15.77■□□□□ 0.11
MKS1-204ENST00000537529 COPAP53621 1224 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 NAGLUP54802 743 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 KPNB1Q14974 876 aaKnown RBP15.77■□□□□ 0.11
MKS1-204ENST00000537529 IL31Q6EBC2 164 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 KLC3Q6P597 504 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 PTAR1Q7Z6K3 402 aaPredicted RBP15.77■□□□□ 0.11
MKS1-204ENST00000537529 FBXO27Q8NI29 283 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 PDCD6IPQ8WUM4 868 aaKnown RBP15.77■□□□□ 0.11
MKS1-204ENST00000537529 HEXDCQ8WVB3 486 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 STON2Q8WXE9 905 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 PEX13Q92968 403 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 HDAC10Q969S8 669 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 IGSF21Q96ID5 467 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 DEFB118Q96PH6 123 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 NDNQ99608 321 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 PPP1R12CQ9BZL4 782 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 IGSF5Q9NSI5 407 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 TRPM5Q9NZQ8 1165 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 HSFX1Q9UBD0 423 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 VTI1BQ9UEU0 232 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 SEPT3Q9UH03 358 aa15.77■□□□□ 0.11
MKS1-204ENST00000537529 MUSKO15146 869 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 HDAC3O15379 428 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 COCHO43405 550 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 LDB2O43679 373 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 CLDN11O75508 207 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 TM7SF2O76062 418 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 UPP2O95045 317 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 GJB5O95377 273 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 PRDX6P30041 224 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 CCNG1P51959 295 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 OXCT1P55809 520 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 ACVR1Q04771 509 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 ARL13AQ5H913 290 aaPredicted RBP15.76■□□□□ 0.11
MKS1-204ENST00000537529 C6orf163Q5TEZ5 329 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 AGAP9Q5VTM2 703 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 SEL1L3Q68CR1 1132 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 DEFB128Q7Z7B8 93 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 SCUBE1Q8IWY4 988 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 RNF168Q8IYW5 571 aaPredicted RBP15.76■□□□□ 0.11
MKS1-204ENST00000537529 CMTM5Q96DZ9 223 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 FAM161BQ96MY7 647 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 OLFM1Q99784 485 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 MGME1Q9BQP7 344 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 PAK6Q9NQU5 681 aaPredicted RBP15.76■□□□□ 0.11
MKS1-204ENST00000537529 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.76■□□□□ 0.11
MKS1-204ENST00000537529 UBA2Q9UBT2 640 aaPredicted RBP15.76■□□□□ 0.11
MKS1-204ENST00000537529 MCM8Q9UJA3 840 aa15.76■□□□□ 0.11
MKS1-204ENST00000537529 MATN2O00339 956 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 NPHS1O60500 1241 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 LTA4HP09960 611 aaKnown RBP15.75■□□□□ 0.11
MKS1-204ENST00000537529 GNAZP19086 355 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 ATP5F1P24539 256 aaPredicted RBP15.75■□□□□ 0.11
MKS1-204ENST00000537529 ARSDP51689 593 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 DNAJB13P59910 316 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 SLC9B1Q4ZJI4 515 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 ZNF789Q5FWF6 425 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 HECTD2Q5U5R9 776 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 DENND1CQ8IV53 801 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 SPATA6LQ8N4H0 392 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 OR7D4Q8NG98 312 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 AGR3Q8TD06 166 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 STMN2Q93045 179 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 ANKRD27Q96NW4 1050 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 CINPQ9BW66 212 aaPredicted RBP15.75■□□□□ 0.11
MKS1-204ENST00000537529 VN1R3Q9BXE9 311 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 CWH43Q9H720 699 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 TCF7L2Q9NQB0 619 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 MIA3Q5JRA6 1907 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 A0A0D9SEW6 157 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 H0Y3Z8 333 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 GJB3O75712 270 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 HMGA1P17096 107 aaKnown RBP15.75■□□□□ 0.11
MKS1-204ENST00000537529 CORO1AP31146 461 aaKnown RBP15.75■□□□□ 0.11
MKS1-204ENST00000537529 SERPINB5P36952 375 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 APLP1P51693 650 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 CSHL1Q14406 222 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 RFTN1Q14699 578 aaPredicted RBP15.75■□□□□ 0.11
MKS1-204ENST00000537529 TAF12Q16514 161 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 KHDC1Q4VXA5 237 aaKnown RBP15.75■□□□□ 0.11
MKS1-204ENST00000537529 TECRLQ5HYJ1 363 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 TPGS2Q68CL5 300 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.75■□□□□ 0.11
MKS1-204ENST00000537529 CHST9Q7L1S5 443 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 ANKRD33Q7Z3H0 272 aa15.75■□□□□ 0.11
MKS1-204ENST00000537529 PIWIL4Q7Z3Z4 852 aaKnown RBP15.75■□□□□ 0.11
MKS1-204ENST00000537529 NET1Q7Z628 596 aaPredicted RBP15.75■□□□□ 0.11
MKS1-204ENST00000537529 BLOC1S5Q8TDH9 187 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms