RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ZNF570Q96NI8 536 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 OLFM1Q99784 485 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 MGME1Q9BQP7 344 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 POLR1EQ9GZS1 481 aaKnown RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 MAGEH1Q9H213 219 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 UXTQ9UBK9 157 aaPredicted RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 DNMT3LQ9UJW3 386 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 ADAM12O43184 909 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 ACSL4O60488 711 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 DIAPH2O60879 1101 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 FGF1P05230 155 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 HLA-DPA1P20036 260 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 MPSTP25325 297 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 OR1E1P30953 314 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 RPL14P50914 215 aaKnown RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 KPNA2P52292 529 aaKnown RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 ARPP19P56211 112 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 PFKPQ01813 784 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF789Q5FWF6 425 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 RBM20Q5T481 1227 aaKnown RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 PRSS55Q6UWB4 352 aaPredicted RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 SCUBE1Q8IWY4 988 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 CPSF7Q8N684 471 aaKnown RBP9.38□□□□□ -0.91
UBE3B-207ENST00000537063 FBXO22Q8NEZ5 403 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 CWH43Q9H720 699 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 VTI1BQ9UEU0 232 aa9.38□□□□□ -0.91
UBE3B-207ENST00000537063 A0A088AWK7 358 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 TBKBP1A7MCY6 615 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 F5H5T6 163 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 SLCO1B7G3V0H7 640 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 HDAC3O15379 428 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 ZBTB14O43829 449 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 PSMG1O95456 288 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 S1PR4O95977 384 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 KCNQ1P51787 676 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 ASPHQ12797 758 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 LAMB3Q13751 1172 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 TRMT5Q32P41 509 aaKnown RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 ARL13AQ5H913 290 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 HEXDCQ8WVB3 486 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 PLD4Q96BZ4 506 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 MYRFLQ96LU7 910 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 HMBSP08397 361 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 HMGA1P17096 107 aaKnown RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 ARSDP51689 593 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 COPAP53621 1224 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 CDH4P55283 916 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 FSCBQ5H9T9 825 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 PGM2L1Q6PCE3 622 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 TMC7Q7Z402 723 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 TXNDC5Q8NBS9 432 aaKnown RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 TSPAN17Q96FV3 270 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 MAELQ96JY0 434 aaKnown RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 PRICKLE1Q96MT3 831 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 CCDC28BQ9BUN5 200 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 PAK6Q9NQU5 681 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 STX18Q9P2W9 335 aaKnown RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 SLC7A8Q9UHI5 535 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 CORO1CQ9ULV4 474 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF840PA6NDX5 716 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 CCNT2O60583 730 aaKnown RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 PIGNO95427 931 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 PARNO95453 639 aaKnown RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 PENKP01210 267 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 ATP5F1P24539 256 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 GLRBP48167 497 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 SUOXP51687 545 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 ACTR3P61158 418 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 CHST9Q7L1S5 443 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 KDELC2Q7Z4H8 507 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 LGI2Q8N0V4 545 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 PHTF2Q8N3S3 785 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 ACTRT2Q8TDY3 377 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 GIPC2Q8TF65 315 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 CMTM5Q96DZ9 223 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 OR52B2Q96RD2 323 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 GPBP1L1Q9HC44 474 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-207ENST00000537063 GPAMQ9HCL2 828 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 TCF7L2Q9NQB0 619 aa9.37□□□□□ -0.91
UBE3B-207ENST00000537063 NT5C1B-RDH14C9J2C7 533 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 GJB3O75712 270 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 ABLIM3O94929 683 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 ATP5C1P36542 298 aaKnown RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 PTDSS1P48651 473 aaKnown RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 TUFMP49411 452 aaKnown RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 GNA12Q03113 381 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 SEL1L3Q68CR1 1132 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 PIWIL4Q7Z3Z4 852 aaKnown RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 MYLK4Q86YV6 388 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 GPATCH11Q8N954 259 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 KDM1BQ8NB78 822 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 OR52K2Q8NGK3 314 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 TRMT2BQ96GJ1 504 aaKnown RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 SCYL1Q96KG9 808 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 PANX3Q96QZ0 392 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 SEMA3CQ99985 751 aa9.36□□□□□ -0.91
UBE3B-207ENST00000537063 TTC24A2A3L6 582 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-207ENST00000537063 KDELR3O43731 214 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms