RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 SPATS2LQ9NUQ6 558 aaKnown RBP5.11□□□□□ -1.59
CCDC7-208ENST00000537047 SIX4Q9UIU6 781 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 LRCH1Q9Y2L9 728 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 FAM172BPA6NC97 362 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 MID1O15344 667 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 SEPT4O43236 478 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 ZIC3O60481 467 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 ATP2C2O75185 946 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 GAGE7O76087 117 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 TBX6O95947 436 aaPredicted RBP5.1□□□□□ -1.59
CCDC7-208ENST00000537047 GAGE12FP0CL80 117 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 GAGE12GP0CL81 117 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 GAGE12IP0CL82 117 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 HNF1BP35680 557 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 GAGE1Q13065 139 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 GAGE4Q13068 117 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 TIGD6Q17RP2 521 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 SLC26A9Q7LBE3 791 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 SFTPA2Q8IWL1 248 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 DNAAF1Q8NEP3 725 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 MASTLQ96GX5 879 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 CYSLTR2Q9NS75 346 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 GRHPRQ9UBQ7 328 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 SRP68Q9UHB9 627 aaKnown RBP5.1□□□□□ -1.59
CCDC7-208ENST00000537047 MMP24Q9Y5R2 645 aa5.1□□□□□ -1.59
CCDC7-208ENST00000537047 CGNL1Q0VF96 1302 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 ADGRF5Q8IZF2 1346 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 ATP1A1P05023 1023 aaKnown RBP5.09□□□□□ -1.59
CCDC7-208ENST00000537047 TIMP3P35625 211 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 CUL4BQ13620 913 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 TNFAIP1Q13829 316 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 OASLQ15646 514 aaKnown RBP5.09□□□□□ -1.59
CCDC7-208ENST00000537047 TANGO2Q6ICL3 276 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 CES5AQ6NT32 575 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 CHD1LQ86WJ1 897 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 SFR1Q86XK3 245 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 OR13A1Q8NGR1 328 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 OR6Y1Q8NGX8 325 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 TTC14Q96N46 770 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 TRMT61BQ9BVS5 477 aaKnown RBP5.09□□□□□ -1.59
CCDC7-208ENST00000537047 ZNF696Q9H7X3 374 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 CHODLQ9H9P2 273 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 NDRG3Q9UGV2 375 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 CNPY2Q9Y2B0 182 aa5.09□□□□□ -1.59
CCDC7-208ENST00000537047 C16orf97H3BN30 126 aa5.08□□□□□ -1.6
CCDC7-208ENST00000537047 FGF17O60258 216 aa5.08□□□□□ -1.6
CCDC7-208ENST00000537047 NDUFS7O75251 213 aa5.08□□□□□ -1.6
CCDC7-208ENST00000537047 SRD5A1P18405 259 aa5.08□□□□□ -1.6
CCDC7-208ENST00000537047 C19orf48Q6RUI8 117 aa5.08□□□□□ -1.6
CCDC7-208ENST00000537047 DSG4Q86SJ6 1040 aa5.08□□□□□ -1.6
CCDC7-208ENST00000537047 LNX1Q8TBB1 728 aaPredicted RBP5.08□□□□□ -1.6
CCDC7-208ENST00000537047 HSPH1Q92598 858 aa5.08□□□□□ -1.6
CCDC7-208ENST00000537047 TMEM19Q96HH6 336 aa5.08□□□□□ -1.6
CCDC7-208ENST00000537047 NPLQ9BXD5 320 aaPredicted RBP5.08□□□□□ -1.6
CCDC7-208ENST00000537047 CSTL1Q9H114 145 aa5.08□□□□□ -1.6
CCDC7-208ENST00000537047 FBRSL1Q9HCM7 1045 aaKnown RBP5.08□□□□□ -1.6
CCDC7-208ENST00000537047 CDC14AQ9UNH5 594 aa5.08□□□□□ -1.6
CCDC7-208ENST00000537047 GREB1LQ9C091 1923 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-208ENST00000537047 SERINC4A6NH21 518 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 IPO5O00410 1097 aaKnown RBP5.07□□□□□ -1.6
CCDC7-208ENST00000537047 SOCS6O14544 535 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 SETSIPP0DME0 302 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 CETPP11597 493 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 CST5P28325 142 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-208ENST00000537047 VEGFCP49767 419 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 HDAC4P56524 1084 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 ICA1Q05084 483 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 SLC20A2Q08357 652 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 CHAF1AQ13111 956 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-208ENST00000537047 FCN2Q15485 313 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 SLC18A3Q16572 532 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 SOWAHAQ2M3V2 549 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 AMZ1Q400G9 498 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 JMJD6Q6NYC1 403 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-208ENST00000537047 KRTAP7-1Q8IUC3 87 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 ODF3L1Q8IXM7 274 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 CACNA2D3Q8IZS8 1091 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 ZMIZ2Q8NF64 920 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 GDPD5Q8WTR4 605 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 ZNF501Q96CX3 271 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-208ENST00000537047 ZNF334Q9HCZ1 680 aaPredicted RBP5.07□□□□□ -1.6
CCDC7-208ENST00000537047 DDX43Q9NXZ2 648 aaKnown RBP5.07□□□□□ -1.6
CCDC7-208ENST00000537047 CD207Q9UJ71 328 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 VDAC3Q9Y277 283 aa5.07□□□□□ -1.6
CCDC7-208ENST00000537047 A0A1B0GU03 582 aa5.06□□□□□ -1.6
CCDC7-208ENST00000537047 STX16-NPEPL1H3BU86 382 aa5.06□□□□□ -1.6
CCDC7-208ENST00000537047 STX16O14662 325 aa5.06□□□□□ -1.6
CCDC7-208ENST00000537047 CSTBP04080 98 aaKnown RBP5.06□□□□□ -1.6
CCDC7-208ENST00000537047 RYKP34925 604 aa5.06□□□□□ -1.6
CCDC7-208ENST00000537047 ESCO2Q56NI9 601 aa5.06□□□□□ -1.6
CCDC7-208ENST00000537047 PARP16Q8N5Y8 322 aa5.06□□□□□ -1.6
CCDC7-208ENST00000537047 CLSTN3Q9BQT9 956 aa5.06□□□□□ -1.6
CCDC7-208ENST00000537047 TTC12Q9H892 705 aaPredicted RBP5.06□□□□□ -1.6
CCDC7-208ENST00000537047 ENTPD7Q9NQZ7 604 aa5.06□□□□□ -1.6
CCDC7-208ENST00000537047 GEMIN8Q9NWZ8 242 aaKnown RBP5.06□□□□□ -1.6
CCDC7-208ENST00000537047 PRC1O43663 620 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 DHX16O60231 1041 aaKnown RBP5.05□□□□□ -1.6
CCDC7-208ENST00000537047 HLA-DOBP13765 273 aa5.05□□□□□ -1.6
CCDC7-208ENST00000537047 RELQ04864 619 aaPredicted RBP5.05□□□□□ -1.6
CCDC7-208ENST00000537047 MAP9Q49MG5 647 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms