RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 TBL1XO60907 577 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 FSHRP23945 695 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 LTBRP36941 435 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 PAPOLAP51003 745 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 PPIDQ08752 370 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 C11orf91Q3C1V1 193 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 C5orf22Q49AR2 442 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 CMPK2Q5EBM0 449 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 FAM78AQ5JUQ0 283 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 RABGAP1LQ5R372 815 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 HTR3DQ70Z44 454 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 NUDCD3Q8IVD9 361 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 FAM217AQ8IXS0 508 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 AZIN2Q96A70 460 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 NAF1Q96HR8 494 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 OSBPL1AQ9BXW6 950 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 DENND2DQ9H6A0 471 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ZFATQ9P243 1243 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 NKX1-2Q9UD57 310 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 CLEC4EQ9ULY5 219 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 LRRC42Q9Y546 428 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 WNT6Q9Y6F9 365 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ANKRD36A6QL64 1941 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 A0A1W2PPC1 479 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 LINGO3P0C6S8 592 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 SP100P23497 879 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 GRIA1P42261 906 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ZBTB16Q05516 673 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 WASHC5Q12768 1159 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 BMPR2Q13873 1038 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 HSF5Q4G112 596 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 FSCBQ5H9T9 825 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 NDUFAF2Q8N183 169 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 UMODL1-AS1Q8N2C9 162 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 TDRD5Q8NAT2 981 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 OR7D4Q8NG98 312 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 USP33Q8TEY7 942 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 SIKE1Q9BRV8 207 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 IGSF9Q9P2J2 1179 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 ACTL7AQ9Y615 435 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 RAD54BQ9Y620 910 aa13.09□□□□□ -0.31
CDK5RAP3-202ENST00000536708 BPTFQ12830 3046 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 KIAA1549LQ6ZVL6 1849 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FAM237BA0A1B0GVD1 139 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 A0A1B0GVM2 712 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TCAF2A6NFQ2 919 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CAPN14A8MX76 684 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 J3KR12 359 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FCHO1O14526 889 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MAFKO60675 156 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 RAMP2O60895 175 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 STK10O94804 968 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 LATS1O95835 1130 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GSRP00390 522 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PFKLP17858 780 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PGAM1P18669 254 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GLDCP23378 1020 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 HOXD9P28356 352 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TMPRSS15P98073 1019 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CHI3L2Q15782 390 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MROH9Q5TGP6 573 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CES4AQ5XG92 561 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CXorf57Q6NSI4 855 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 Q7L0L9 218 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ZNF354CQ86Y25 554 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CARNMT1Q8N4J0 409 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ZNF483Q8TF39 744 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CDKL2Q92772 493 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ASIC4Q96FT7 647 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FERMT1Q9BQL6 677 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FAM167BQ9BTA0 163 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MECRQ9BV79 373 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 SLC13A1Q9BZW2 595 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 LINC00597Q9H2U6 94 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 DCLRE1BQ9H816 532 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FBXO6Q9NRD1 293 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TAS2R1Q9NYW7 299 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TRIOO75962 3097 aa13.08□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PTPN3P26045 913 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CDH4P55283 916 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 MTA1Q13330 715 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 FRG1Q14331 258 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 INSCQ1MX18 579 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TRIM68Q6AZZ1 485 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 PACS1Q6VY07 963 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 CRLF3Q8IUI8 442 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ZNF567Q8N184 647 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 HJURPQ8NCD3 748 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 DDI1Q8WTU0 396 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ZFYVE19Q96K21 471 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 ASB16Q96NS5 453 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 NUDCD1Q96RS6 583 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TRIM56Q9BRZ2 755 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 WWP1Q9H0M0 922 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 S1PR5Q9H228 398 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 THAP1Q9NVV9 213 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 TICRRQ7Z2Z1 1910 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 E2F8A0AVK6 867 aa13.07□□□□□ -0.32
CDK5RAP3-202ENST00000536708 GYG2O15488 501 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms