RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 PCDH8O95206 1070 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 ADRB3P13945 408 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 HNRNPA2B1P22626 353 aaKnown RBP12.6□□□□□ -0.39
PRKDC-207ENST00000536483 SUOXP51687 545 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 NEK3P51956 506 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 SLC25A11Q02978 314 aaKnown RBP12.6□□□□□ -0.39
PRKDC-207ENST00000536483 TLE3Q04726 772 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 NSUN2Q08J23 767 aaKnown RBP eCLIP12.6□□□□□ -0.39
PRKDC-207ENST00000536483 RFTN1Q14699 578 aaPredicted RBP12.6□□□□□ -0.39
PRKDC-207ENST00000536483 TCEAL1Q15170 157 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 CYTH1Q15438 398 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 ZNF805Q5CZA5 627 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 ZNF542PQ5EBM4 170 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 SEL1L3Q68CR1 1132 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 GCNT7Q6ZNI0 430 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 GPR155Q7Z3F1 870 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 POLNQ7Z5Q5 900 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 SPACA3Q8IXA5 215 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 SLC22A18ASQ8N1D0 253 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 ARHGEF26Q96DR7 871 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 NUP85Q9BW27 656 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 SLC39A8Q9C0K1 460 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 ZWILCHQ9H900 591 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 ABHD10Q9NUJ1 306 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 MGAQ8IWI9 3026 aa12.6□□□□□ -0.39
PRKDC-207ENST00000536483 TDRD6O60522 2096 aaKnown RBP12.6□□□□□ -0.39
PRKDC-207ENST00000536483 TSPAN11A1L157 253 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 ARHGAP42A6NI28 874 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 TSPAN6O43657 245 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 MFAP3LO75121 409 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 MPOP05164 745 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 H2AFZP0C0S5 128 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 RARAP10276 462 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 ALPPL2P10696 532 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 CKMT1AP12532 417 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 TCF4P15884 667 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 IL4RP24394 825 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 ARSEP51690 589 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 CXADRP78310 365 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 RAD51Q06609 339 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 IL10RBQ08334 325 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 GRM3Q14832 879 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 TMCO4Q5TGY1 634 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 CDCP2Q5VXM1 449 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 KIAA1161Q6NSJ0 714 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 Q6ZSR6 202 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 H2AFVQ71UI9 128 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 ABI3BPQ7Z7G0 1075 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 GRIN3AQ8TCU5 1115 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 NAF1Q96HR8 494 aaKnown RBP12.59□□□□□ -0.39
PRKDC-207ENST00000536483 BMFQ96LC9 184 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 APOLD1Q96LR9 279 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 GDAP1L1Q96MZ0 367 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 ZNF599Q96NL3 588 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 LENG8Q96PV6 779 aaPredicted RBP12.59□□□□□ -0.39
PRKDC-207ENST00000536483 C1QTNF2Q9BXJ5 285 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 GPR27Q9NS67 375 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 ZNHIT6Q9NWK9 470 aaKnown RBP12.59□□□□□ -0.39
PRKDC-207ENST00000536483 LHX3Q9UBR4 397 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 ANAPC7Q9UJX3 599 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 HS3ST3A1Q9Y663 406 aa12.59□□□□□ -0.39
PRKDC-207ENST00000536483 TEX51A0A1B0GUA7 166 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 C16orf96A6NNT2 1141 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 H3BRJ5 948 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 J3KR12 359 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 OPA1O60313 960 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 NEBLO76041 1014 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 MTA2O94776 668 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 PROSCO94903 275 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 PAK4O96013 591 aaPredicted RBP12.58□□□□□ -0.4
PRKDC-207ENST00000536483 TMEM253P0C7T8 217 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 MAN1A1P33908 653 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 PAPOLAP51003 745 aaKnown RBP12.58□□□□□ -0.4
PRKDC-207ENST00000536483 DNA2P51530 1060 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 RPS21P63220 83 aaKnown RBP12.58□□□□□ -0.4
PRKDC-207ENST00000536483 FGL2Q14314 439 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 GDPD4Q6W3E5 623 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 PARS2Q7L3T8 475 aaKnown RBP12.58□□□□□ -0.4
PRKDC-207ENST00000536483 LRRC49Q8IUZ0 686 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 CNGA4Q8IV77 575 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 NPWQ8N729 165 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 LSM14AQ8ND56 463 aaKnown RBP12.58□□□□□ -0.4
PRKDC-207ENST00000536483 FEM1CQ96JP0 617 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 ZNF641Q96N77 438 aaPredicted RBP12.58□□□□□ -0.4
PRKDC-207ENST00000536483 CSPG4P5Q96PW8 444 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 TUBGCP5Q96RT8 1024 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 LGMNQ99538 433 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 TM6SF2Q9BZW4 377 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 GRPEL1Q9HAV7 217 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 DNAJC28Q9NX36 388 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 NLGN3Q9NZ94 848 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 UBA2Q9UBT2 640 aaPredicted RBP12.58□□□□□ -0.4
PRKDC-207ENST00000536483 INTUQ9ULD6 942 aa12.58□□□□□ -0.4
PRKDC-207ENST00000536483 FLNBO75369 2602 aaKnown RBP12.57□□□□□ -0.4
PRKDC-207ENST00000536483 LY6G6EA0A0G2JKS1 128 aa12.57□□□□□ -0.4
PRKDC-207ENST00000536483 POM121BA6NF01 834 aa12.57□□□□□ -0.4
PRKDC-207ENST00000536483 NEMP2A6NFY4 417 aa12.57□□□□□ -0.4
PRKDC-207ENST00000536483 A6NNZ2 444 aa12.57□□□□□ -0.4
PRKDC-207ENST00000536483 K7ESM1 405 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms