RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, human

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-205	ENST00000536107	SDHAF4	Q5VUM1	108 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	RHBDF2	Q6PJF5	856 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	RBM44	Q6ZP01	1051 aa	Known RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	CYB5R4	Q7L1T6	521 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	RSRC2	Q7L4I2	434 aa	Known RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	ZBTB8OS	Q8IWT0	167 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	FBXO39	Q8N4B4	442 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	SRBD1	Q8N5C6	995 aa	Known RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	TERB1	Q8NA31	727 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	STKLD1	Q8NE28	680 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	RDM1	Q8NG50	284 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	GANC	Q8TET4	914 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	LRRC15	Q8TF66	581 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	JPH3	Q8WXH2	748 aa	Predicted RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	GTF3C6	Q969F1	213 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	GJA10	Q969M2	543 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	C18orf25	Q96B23	403 aa	Predicted RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	BIRC7	Q96CA5	298 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	SGSM3	Q96HU1	749 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	CCDC43	Q96MW1	224 aa	Known RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	GBP4	Q96PP9	640 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	RIT2	Q99578	217 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	GABRG3	Q99928	467 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	AARSD1	Q9BTE6	412 aa	Known RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	GLT8D2	Q9H1C3	349 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	PDZD7	Q9H5P4	517 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	DHX33	Q9H6R0	707 aa	Known RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	TTC12	Q9H892	705 aa	Predicted RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	PTPRH	Q9HD43	1115 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	DNAJC17	Q9NVM6	304 aa	Known RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	UXT	Q9UBK9	157 aa	Predicted RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	DKK2	Q9UBU2	259 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	ARHGAP26	Q9UNA1	814 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	STON1	Q9Y6Q2	735 aa		4.15	□□□□□ -1.75
YBX3-205	ENST00000536107	CSMD2	Q7Z408	3487 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	HEATR9	A2RTY3	570 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CPED1	A4D0V7	1026 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	PRSS44	E7EML9	344 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	HIP1	O00291	1037 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	MSH4	O15457	936 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	PRODH	O43272	600 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CNTN5	O94779	1100 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	TOX4	O94842	621 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	IGLV2-14	P01704	120 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	JUN	P05412	331 aa	Known RBP	4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CYP3A4	P08684	503 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	JMJD7	P0C870	316 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	ALPPL2	P10696	532 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	HAPLN1	P10915	354 aa	Predicted RBP	4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	PABPC1	P11940	636 aa	Known RBP	4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CKMT1A	P12532	417 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CD1E	P15812	388 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	HMGA1	P17096	107 aa	Known RBP	4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	KRT15	P19012	456 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	HK1	P19367	917 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	NR1D1	P20393	614 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	YWHAB	P31946	246 aa	Known RBP	4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	GPR15	P49685	360 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	MRPL49	Q13405	166 aa	Known RBP	4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CAPS	Q13938	189 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	DCAF4L1	Q3SXM0	396 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	ATF7IP2	Q5U623	682 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	SFMBT2	Q5VUG0	894 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CRTC1	Q6UUV9	634 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	DSG4	Q86SJ6	1040 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	ZFAND4	Q86XD8	727 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	TRMT2A	Q8IZ69	625 aa	Known RBP	4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	HIPK4	Q8NE63	616 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	IFI44	Q8TCB0	444 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	SLC9A6	Q92581	669 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	NDRG1	Q92597	394 aa	Known RBP	4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	EVI5L	Q96CN4	794 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CCDC136	Q96JN2	1154 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	ZNF778	Q96MU6	729 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CATSPER2	Q96P56	530 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CCDC94	Q9BW85	323 aa	Predicted RBP	4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	TRIM9	Q9C026	710 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	BTBD1	Q9H0C5	482 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	EPB41L5	Q9HCM4	733 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	C6orf50	Q9HD87	102 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CFAP97	Q9P2B7	532 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	HSFX1	Q9UBD0	423 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CBLC	Q9ULV8	474 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	PCDHGA7	Q9Y5G6	932 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	ENTPD2	Q9Y5L3	495 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	MYH6	P13533	1939 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	APC	P25054	2843 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	MN1	Q10571	1320 aa	Predicted RBP	4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	TTC41P	Q6P2S7	1318 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	CCDC168	Q8NDH2	2452 aa		4.14	□□□□□ -1.75
YBX3-205	ENST00000536107	MED13	Q9UHV7	2174 aa		4.13	□□□□□ -1.75
YBX3-205	ENST00000536107	PIPSL	A2A3N6	862 aa		4.13	□□□□□ -1.75
YBX3-205	ENST00000536107	PRRT4	C9JH25	899 aa		4.13	□□□□□ -1.75
YBX3-205	ENST00000536107	GOLGA6L22	H0YM25	854 aa		4.13	□□□□□ -1.75
YBX3-205	ENST00000536107	TLR4	O00206	839 aa		4.13	□□□□□ -1.75
YBX3-205	ENST00000536107	PLD2	O14939	933 aa		4.13	□□□□□ -1.75
YBX3-205	ENST00000536107	WNT1	P04628	370 aa		4.13	□□□□□ -1.75

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