RNA–Protein interactions for RNA: ENST00000535844.1

AC048338.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC048338.1, Length 2,748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048338.1-201ENST00000535844 DCPSQ96C86 337 aaKnown RBP11.29□□□□□ -0.6
AC048338.1-201ENST00000535844 NXNL1Q96CM4 212 aa11.29□□□□□ -0.6
AC048338.1-201ENST00000535844 ZFP42Q96MM3 310 aa11.29□□□□□ -0.6
AC048338.1-201ENST00000535844 ZNF560Q96MR9 790 aa11.29□□□□□ -0.6
AC048338.1-201ENST00000535844 TSNARE1Q96NA8 513 aa11.29□□□□□ -0.6
AC048338.1-201ENST00000535844 SERPINI1Q99574 410 aa11.29□□□□□ -0.6
AC048338.1-201ENST00000535844 C1QTNF1Q9BXJ1 281 aa11.29□□□□□ -0.6
AC048338.1-201ENST00000535844 ATXN3LQ9H3M9 355 aa11.29□□□□□ -0.6
AC048338.1-201ENST00000535844 CDYLQ9Y232 598 aa11.29□□□□□ -0.6
AC048338.1-201ENST00000535844 FOXD2O60548 495 aaPredicted RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 PARNO95453 639 aaKnown RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 AHSGP02765 367 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 SRGAP2BP0DMP2 458 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 HNRNPLP14866 589 aaKnown RBP eCLIP11.28□□□□□ -0.63e-7■□□□□ 11.2
AC048338.1-201ENST00000535844 SMPD1P17405 629 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 PTPN1P18031 435 aaKnown RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 NELFEP18615 380 aaKnown RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 FGFR3P22607 806 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 XIAPP98170 497 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 CD300CQ08708 224 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 NRF1Q16656 503 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 VASH1Q7L8A9 365 aaPredicted RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 MFSD6LQ8IWD5 586 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 PIAS4Q8N2W9 510 aaPredicted RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 BTBD9Q96Q07 612 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 NEURL2Q9BR09 285 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 SYT17Q9BSW7 474 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 C2orf49Q9BVC5 232 aaPredicted RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 SEMA6AQ9H2E6 1030 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 AASDHPPTQ9NRN7 309 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 C6orf203Q9P0P8 240 aaPredicted RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 RIMS3Q9UJD0 308 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 RBMX2Q9Y388 322 aaKnown RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 COPG1Q9Y678 874 aaKnown RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 SLC30A1Q9Y6M5 507 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 DFFAO00273 331 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 CSPG5O95196 566 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 MT-CO1P00395 513 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 PGK1P00558 417 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 MMP3P08254 477 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 BDNFP23560 247 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 ADGRE1Q14246 886 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 DGKDQ16760 1214 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 IL31Q6EBC2 164 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 RNF135Q8IUD6 432 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 FAM20CQ8IXL6 584 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 GPC2Q8N158 579 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 GOLM1Q8NBJ4 401 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 IPMKQ8NFU5 416 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 DNAJB3Q8WWF6 145 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 ZNF419Q96HQ0 510 aaPredicted RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 GPR22Q99680 433 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 PLGRKTQ9HBL7 147 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 CYP4F12Q9HCS2 524 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 GTSE1Q9NYZ3 720 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 ADA2Q9NZK5 511 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 SLC2A6Q9UGQ3 507 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 GNEQ9Y223 722 aaKnown RBP11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 COQ6Q9Y2Z9 468 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 TLL2Q9Y6L7 1015 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 COL1A2P08123 1366 aa11.28□□□□□ -0.6
AC048338.1-201ENST00000535844 ARHGAP10A1A4S6 786 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 MEIS3P2A8K0S8 358 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 KCNU1A8MYU2 1149 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 AURKAO14965 403 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 PEX1O43933 1283 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 CD4P01730 458 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 CDH2P19022 906 aaPredicted RBP11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 BCAP31P51572 246 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 PLK1P53350 603 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 CCNA1P78396 465 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 RALGDSQ12967 914 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 LRRC8EQ6NSJ5 796 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 RWDD4Q6NW29 188 aaKnown RBP11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 BNIPLQ7Z465 357 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 CNTD1Q8N815 330 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 OR6J1Q8NGC5 347 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 RP9Q8TA86 221 aaKnown RBP11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 EFHD2Q96C19 240 aaPredicted RBP11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 CNDP1Q96KN2 507 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 SLC2A13Q96QE2 648 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 IL22Q9GZX6 179 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 SIK2Q9H0K1 926 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 PCDHAC1Q9H158 963 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 VTA1Q9NP79 307 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 GDAP2Q9NXN4 497 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 OR12D3Q9UGF7 316 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 PRPF19Q9UMS4 504 aaKnown RBP11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 BRCA2P51587 3418 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 NRCAMQ92823 1304 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 NOTOA8MTQ0 251 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 C9IYK1 514 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 CXCL11O14625 94 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 DDHD2O94830 711 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 LRIG2O94898 1065 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 SNAI1O95863 264 aaPredicted RBP11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 DARSP14868 501 aaKnown RBP11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 EIF2B2P49770 351 aaKnown RBP11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 GJA9P57773 515 aa11.27□□□□□ -0.61
AC048338.1-201ENST00000535844 MYBPC1Q00872 1141 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms