RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 NT5C3BQ969T7 300 aa19.72■□□□□ 0.75
LRP6-202ENST00000535731 ZYG11BQ9C0D3 744 aa19.72■□□□□ 0.75
LRP6-202ENST00000535731 INTS2Q9H0H0 1204 aaKnown RBP19.72■□□□□ 0.75
LRP6-202ENST00000535731 CDH19Q9H159 772 aa19.72■□□□□ 0.75
LRP6-202ENST00000535731 LRRC4CQ9HCJ2 640 aa19.72■□□□□ 0.75
LRP6-202ENST00000535731 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.72■□□□□ 0.75
LRP6-202ENST00000535731 LRIT1Q9P2V4 623 aa19.72■□□□□ 0.75
LRP6-202ENST00000535731 STAP1Q9ULZ2 295 aa19.72■□□□□ 0.75
LRP6-202ENST00000535731 PCDHGC3Q9UN70 934 aa19.72■□□□□ 0.75
LRP6-202ENST00000535731 UNC13CQ8NB66 2214 aa19.72■□□□□ 0.75
LRP6-202ENST00000535731 BLACEA4D250 179 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 TFE3P19532 575 aaPredicted RBP19.71■□□□□ 0.75
LRP6-202ENST00000535731 GEMIN4P57678 1058 aaKnown RBP19.71■□□□□ 0.75
LRP6-202ENST00000535731 ARHGEF7Q14155 803 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 NFATC4Q14934 902 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 LRRC14Q15048 493 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 IRF4Q15306 451 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 GDPD4Q6W3E5 623 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 TMPRSS9Q7Z410 1059 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 VOPP1Q96AW1 172 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 TIGD1Q96MW7 591 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 CATSPER2Q96P56 530 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 HAPLN3Q96S86 360 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 RBM15Q96T37 977 aaKnown RBP eCLIP19.71■□□□□ 0.75
LRP6-202ENST00000535731 APOOQ9BUR5 198 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 SEMA6CQ9H3T2 930 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 TMPRSS4Q9NRS4 437 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 KLQ9UEF7 1012 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 RELNP78509 3460 aa19.71■□□□□ 0.75
LRP6-202ENST00000535731 USP9XQ93008 2570 aaPredicted RBP19.7■□□□□ 0.74
LRP6-202ENST00000535731 ERBB2P04626 1255 aa19.7■□□□□ 0.74
LRP6-202ENST00000535731 ETFBP38117 255 aa19.7■□□□□ 0.74
LRP6-202ENST00000535731 SULT1E1P49888 294 aa19.7■□□□□ 0.74
LRP6-202ENST00000535731 RNASE9P60153 205 aaKnown RBP19.7■□□□□ 0.74
LRP6-202ENST00000535731 C16orf72Q14CZ0 275 aa19.7■□□□□ 0.74
LRP6-202ENST00000535731 PIM3Q86V86 326 aa19.7■□□□□ 0.74
LRP6-202ENST00000535731 ZDHHC17Q8IUH5 632 aa19.7■□□□□ 0.74
LRP6-202ENST00000535731 PASD1Q8IV76 773 aa19.7■□□□□ 0.74
LRP6-202ENST00000535731 IL22RA1Q8N6P7 574 aa19.7■□□□□ 0.74
LRP6-202ENST00000535731 C1orf131Q8NDD1 294 aaKnown RBP19.7■□□□□ 0.74
LRP6-202ENST00000535731 FAM46DQ8NEK8 389 aa19.7■□□□□ 0.74
LRP6-202ENST00000535731 ARHGEF2Q92974 986 aaKnown RBP19.7■□□□□ 0.74
LRP6-202ENST00000535731 DHTKD1Q96HY7 919 aaPredicted RBP19.7■□□□□ 0.74
LRP6-202ENST00000535731 TAAR9Q96RI9 348 aa19.7■□□□□ 0.74
LRP6-202ENST00000535731 USP9YO00507 2555 aaPredicted RBP19.7■□□□□ 0.74
LRP6-202ENST00000535731 PSMA7O14818 248 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 NUDT21O43809 227 aaKnown RBP19.69■□□□□ 0.74
LRP6-202ENST00000535731 CCL4P13236 92 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 TIMP2P16035 220 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 ITIH2P19823 946 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 PTMSP20962 102 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 B4GALNT1Q00973 533 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 RAD51Q06609 339 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 STIM1Q13586 685 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 INPP5AQ14642 412 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 WSCD2Q2TBF2 565 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 TMEM52BQ4KMG9 183 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 C14orf28Q4W4Y0 310 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 LRRC73Q5JTD7 316 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 TAF8Q7Z7C8 310 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 DRC7Q8IY82 874 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 FAM81BQ96LP2 452 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 WRAP53Q9BUR4 548 aaKnown RBP19.69■□□□□ 0.74
LRP6-202ENST00000535731 SYNCQ9H7C4 482 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 PPARGC1AQ9UBK2 798 aaKnown RBP19.69■□□□□ 0.74
LRP6-202ENST00000535731 PCDHGA3Q9Y5H0 932 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 DGKBQ9Y6T7 804 aa19.69■□□□□ 0.74
LRP6-202ENST00000535731 BECN2A8MW95 431 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 SMC2O95347 1197 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 CPNE6O95741 557 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 MBD3O95983 291 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 ACVRL1P37023 503 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 USP8P40818 1118 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 HLTFQ14527 1009 aaKnown RBP eCLIP19.68■□□□□ 0.74
LRP6-202ENST00000535731 SLC25A52Q3SY17 297 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 EFHC2Q5JST6 749 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 C9orf43Q8TAL5 461 aaPredicted RBP19.68■□□□□ 0.74
LRP6-202ENST00000535731 SPATA20Q8TB22 786 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 GPT2Q8TD30 523 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 WDR92Q96MX6 357 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 TBCBQ99426 244 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 ZNF71Q9NQZ8 489 aaPredicted RBP19.68■□□□□ 0.74
LRP6-202ENST00000535731 DKK3Q9UBP4 350 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 HOOK1Q9UJC3 728 aaKnown RBP19.68■□□□□ 0.74
LRP6-202ENST00000535731 HPCAL4Q9UM19 191 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 NOTCH2Q04721 2471 aa19.68■□□□□ 0.74
LRP6-202ENST00000535731 HGSO14964 777 aaPredicted RBP19.67■□□□□ 0.74
LRP6-202ENST00000535731 CAPN5O15484 640 aaPredicted RBP19.67■□□□□ 0.74
LRP6-202ENST00000535731 B4GAT1O43505 415 aa19.67■□□□□ 0.74
LRP6-202ENST00000535731 LIFP15018 202 aa19.67■□□□□ 0.74
LRP6-202ENST00000535731 SUOXP51687 545 aa19.67■□□□□ 0.74
LRP6-202ENST00000535731 MAP9Q49MG5 647 aa19.67■□□□□ 0.74
LRP6-202ENST00000535731 PTPN20Q4JDL3 420 aa19.67■□□□□ 0.74
LRP6-202ENST00000535731 NYAP1Q6ZVC0 841 aa19.67■□□□□ 0.74
LRP6-202ENST00000535731 IRF2BP1Q8IU81 584 aa19.67■□□□□ 0.74
LRP6-202ENST00000535731 TRIM59Q8IWR1 403 aa19.67■□□□□ 0.74
LRP6-202ENST00000535731 RETREG1Q9H6L5 497 aa19.67■□□□□ 0.74
LRP6-202ENST00000535731 PLAAQ9Y263 795 aa19.67■□□□□ 0.74
LRP6-202ENST00000535731 COQ6Q9Y2Z9 468 aa19.67■□□□□ 0.74
LRP6-202ENST00000535731 OR1A2Q9Y585 309 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms