RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 SCNN1BP51168 640 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 HADHBP55084 474 aaKnown RBP13.93□□□□□ -0.18
TMEM258-203ENST00000535297 CLDN2P57739 230 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 BCL2L1Q07817 233 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 FOXC1Q12948 553 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 UGP2Q16851 508 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 TMEM52BQ4KMG9 183 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 RALGPS1Q5JS13 557 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 PRAMEF14Q5SWL7 426 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 ZFYVE27Q5T4F4 411 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 LRRC38Q5VT99 294 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 ERAP2Q6P179 960 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 DCP2Q8IU60 420 aaKnown RBP13.93□□□□□ -0.18
TMEM258-203ENST00000535297 CAMK1DQ8IU85 385 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 PIAS4Q8N2W9 510 aaPredicted RBP13.93□□□□□ -0.18
TMEM258-203ENST00000535297 OR13H1Q8NG92 308 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 SAP25Q8TEE9 199 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 ECHDC3Q96DC8 303 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 KLF6Q99612 283 aaPredicted RBP13.93□□□□□ -0.18
TMEM258-203ENST00000535297 MGME1Q9BQP7 344 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 C1QTNF7Q9BXJ2 289 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 GPR27Q9NS67 375 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 ATP8A1Q9Y2Q0 1164 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 ACACBO00763 2458 aa13.93□□□□□ -0.18
TMEM258-203ENST00000535297 LRRK1Q38SD2 2015 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 CEP295Q9C0D2 2601 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 LRRD1A4D1F6 860 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
TMEM258-203ENST00000535297 FPGTO14772 594 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 RAD51BO15315 384 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 SOCS5O75159 536 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 TM7SF2O76062 418 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 ITGAVP06756 1048 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 FTH1P19P0C7X4 201 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 CR2P20023 1033 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 KDELR1P24390 212 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 MMP12P39900 470 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 MMP13P45452 471 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 RABIFP47224 123 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 SPA17Q15506 151 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 IFI16Q16666 785 aaKnown RBP13.92□□□□□ -0.18
TMEM258-203ENST00000535297 MARC1Q5VT66 337 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 TIGD7Q6NT04 549 aaPredicted RBP13.92□□□□□ -0.18
TMEM258-203ENST00000535297 PTAR1Q7Z6K3 402 aaPredicted RBP13.92□□□□□ -0.18
TMEM258-203ENST00000535297 ZSWIM9Q86XI8 627 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 GATAD2AQ86YP4 633 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 PQLC3Q8N755 202 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 SPOCK2Q92563 424 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 RAPGEF5Q92565 580 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 FATE1Q969F0 183 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 IFT43Q96FT9 208 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 BMFQ96LC9 184 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 NUDCD1Q96RS6 583 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 PCDH12Q9NPG4 1184 aa13.92□□□□□ -0.18
TMEM258-203ENST00000535297 APOBEC2Q9Y235 224 aaKnown RBP13.92□□□□□ -0.18
TMEM258-203ENST00000535297 A0A0A6YYK5 440 aaPredicted RBP13.91□□□□□ -0.18
TMEM258-203ENST00000535297 A0A1W2PQ67 120 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 CFAP69A5D8W1 941 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 POM121BA6NF01 834 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 TRAFD1O14545 582 aaPredicted RBP13.91□□□□□ -0.18
TMEM258-203ENST00000535297 MMP20O60882 483 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 KRT1P04264 644 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 ITIH2P19823 946 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 MX2P20592 715 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 POLR2LP62875 67 aaKnown RBP13.91□□□□□ -0.18
TMEM258-203ENST00000535297 Q6ZSR6 202 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 KANSL1Q7Z3B3 1105 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 TMTC1Q8IUR5 882 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 RHOT1Q8IXI2 618 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 SLC22A18ASQ8N1D0 253 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 PGBD5Q8N414 524 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 TEX26Q8N6G2 289 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 PAF1Q8N7H5 531 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 MAML1Q92585 1016 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 ZNF830Q96NB3 372 aaPredicted RBP13.91□□□□□ -0.18
TMEM258-203ENST00000535297 TSGA13Q96PP4 275 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 RNF157Q96PX1 679 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 WRAP53Q9BUR4 548 aaKnown RBP13.91□□□□□ -0.18
TMEM258-203ENST00000535297 SCUBE2Q9NQ36 999 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 HAUS2Q9NVX0 235 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 DDX56Q9NY93 547 aaKnown RBP13.91□□□□□ -0.18
TMEM258-203ENST00000535297 FTSJ1Q9UET6 329 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 AMACRQ9UHK6 382 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 WASF3Q9UPY6 502 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 PCDHA13Q9Y5I0 950 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 CHD8Q9HCK8 2581 aa13.91□□□□□ -0.18
TMEM258-203ENST00000535297 C3orf70A6NLC5 250 aaPredicted RBP13.9□□□□□ -0.18
TMEM258-203ENST00000535297 TOR1BO14657 336 aa13.9□□□□□ -0.18
TMEM258-203ENST00000535297 MATN3O15232 486 aa13.9□□□□□ -0.18
TMEM258-203ENST00000535297 HTRA2O43464 458 aaPredicted RBP13.9□□□□□ -0.18
TMEM258-203ENST00000535297 TNFSF14O43557 240 aa13.9□□□□□ -0.18
TMEM258-203ENST00000535297 PSTPIP1O43586 416 aa13.9□□□□□ -0.18
TMEM258-203ENST00000535297 SPOPO43791 374 aa13.9□□□□□ -0.18
TMEM258-203ENST00000535297 IPO7O95373 1038 aaKnown RBP13.9□□□□□ -0.18
TMEM258-203ENST00000535297 C6P13671 934 aa13.9□□□□□ -0.18
TMEM258-203ENST00000535297 COMTP21964 271 aa13.9□□□□□ -0.18
TMEM258-203ENST00000535297 CCNCP24863 283 aa13.9□□□□□ -0.18
TMEM258-203ENST00000535297 IGFALSP35858 605 aa13.9□□□□□ -0.18
TMEM258-203ENST00000535297 NOP2P46087 812 aaKnown RBP13.9□□□□□ -0.18
TMEM258-203ENST00000535297 PFN3P60673 137 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms