RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CPEB1Q9BZB8 566 aaKnown RBP10.2□□□□□ -0.78
CLSTN3-203ENST00000534830 ABCG4Q9H172 646 aa10.2□□□□□ -0.78
CLSTN3-203ENST00000534830 LRRC19Q9H756 370 aa10.2□□□□□ -0.78
CLSTN3-203ENST00000534830 SEPT11Q9NVA2 429 aaKnown RBP10.2□□□□□ -0.78
CLSTN3-203ENST00000534830 UCKL1Q9NWZ5 548 aa10.2□□□□□ -0.78
CLSTN3-203ENST00000534830 SEPT3Q9UH03 358 aa10.2□□□□□ -0.78
CLSTN3-203ENST00000534830 GGT7Q9UJ14 662 aa10.2□□□□□ -0.78
CLSTN3-203ENST00000534830 SATB2Q9UPW6 733 aa10.2□□□□□ -0.78
CLSTN3-203ENST00000534830 SSUH2Q9Y2M2 353 aa10.2□□□□□ -0.78
CLSTN3-203ENST00000534830 NOTCH2Q04721 2471 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 LY6G6EA0A0G2JKS1 128 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 SPTY2D1-AS1A0A0U1RR47 76 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 A0A1B0GTH6 734 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 A0A1W2PQC6 194 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 IGLON5A6NGN9 336 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 LRRC53A6NM62 1247 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 A6NNZ2 444 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 SMTNL1A8MU46 457 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 RASA4BC9J798 803 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 RASA4O43374 803 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 SUV39H1O43463 412 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 BUB1O43683 1085 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 TNFAIP3P21580 790 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 PFN3P60673 137 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 FZD2Q14332 565 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 NR1I3Q14994 352 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 CYTH1Q15438 398 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 PARP15Q460N3 678 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 C4orf17Q53FE4 359 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 ATXN7L2Q5T6C5 722 aaPredicted RBP10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 CDCP2Q5VXM1 449 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 PPP1R2P3Q6NXS1 205 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 SCYL2Q6P3W7 929 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 LEKR1Q6ZMV7 388 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 ZNF571Q7Z3V5 609 aaPredicted RBP10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 DENND6BQ8NEG7 585 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 OR6K2Q8NGY2 324 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 HCAR2Q8TDS4 363 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 FNIP1Q8TF40 1166 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 CENPTQ96BT3 561 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 KLHL32Q96NJ5 620 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 NAT10Q9H0A0 1025 aaKnown RBP10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 HAUS4Q9H6D7 363 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 CATSPERBQ9H7T0 1116 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 PDFQ9HBH1 243 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 STARD5Q9NSY2 213 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 PARVAQ9NVD7 372 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 DKK3Q9UBP4 350 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 LHX3Q9UBR4 397 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 KLF15Q9UIH9 416 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 U3KQA8 63 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 BSNQ9UPA5 3926 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 LRP4O75096 1905 aa10.19□□□□□ -0.78
CLSTN3-203ENST00000534830 RP1P56715 2156 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 NBPF19A0A087WUL8 3843 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 TMEM191CA6NGB0 347 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 EIF3CLB5ME19 914 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 KRIT1O00522 736 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 DDX3XO00571 662 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 SCAMP1O15126 338 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 FGF10O15520 208 aaPredicted RBP10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 FFAR2O15552 330 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 CREB3O43889 395 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 CSF2P04141 144 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 UGT2B4P06133 528 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 CKMT1AP12532 417 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 TIMP2P16035 220 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 RABIFP47224 123 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 NDST2P52849 883 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 MAPK8IP2Q13387 824 aaPredicted RBP10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 CA9Q16790 459 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 LINC00303Q3SY05 128 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 TPRG1LQ5T0D9 272 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 ERMARDQ5T6L9 678 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 AFMIDQ63HM1 303 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 DCUN1D2Q6PH85 259 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 FOXR1Q6PIV2 292 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 GDPD4Q6W3E5 623 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 DNAAF5Q86Y56 855 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 NETO2Q8NC67 525 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 SLC46A1Q96NT5 459 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 CCNL2Q96S94 520 aaPredicted RBP10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 PEBP4Q96S96 227 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 EIF3CQ99613 913 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 EPAS1Q99814 870 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 CALN1Q9BXU9 219 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 EDEM3Q9BZQ6 932 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 NLGN3Q9NZ94 848 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 ITM2BQ9Y287 266 aa10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 TEP1Q99973 2627 aaKnown RBP10.18□□□□□ -0.78
CLSTN3-203ENST00000534830 TSPAN11A1L157 253 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 ANKRD62A6NC57 917 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 TMCO5BA8MYB1 307 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 J3KR12 359 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 INSIG1O15503 277 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 ATMINO43313 823 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 PRAMEF11O60813 436 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 IGSF6O95976 241 aa10.17□□□□□ -0.78
CLSTN3-203ENST00000534830 FTLP02792 175 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms