RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 SCN7AQ01118 1682 aa3.75□□□□□ -1.81
USP48-215ENST00000534705 SAC3D1A6NKF1 404 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 TCEA3O75764 348 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 METTL18O95568 372 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 MYZAPP0CAP1 466 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 TNNT1P13805 278 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 PRKCHP24723 683 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 GSTM2P28161 218 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 TYK2P29597 1187 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 MAN1A1P33908 653 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 KCNJ4P48050 445 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 TRAPPC10P48553 1259 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 CYP2J2P51589 502 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 PRKAA2P54646 552 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 P2RX3P56373 397 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 LMOD3Q0VAK6 560 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 C10orf62Q5T681 223 aaPredicted RBP3.74□□□□□ -1.81
USP48-215ENST00000534705 UBAP2Q5T6F2 1119 aaKnown RBP3.74□□□□□ -1.81
USP48-215ENST00000534705 NUGGCQ68CJ6 796 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 MTFR2Q6P444 385 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 KRBA2Q6ZNG9 492 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 RRAGAQ7L523 313 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 CCDC25Q86WR0 208 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 TMEM199Q8N511 208 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 NKAPQ8N5F7 415 aaKnown RBP3.74□□□□□ -1.81
USP48-215ENST00000534705 KDM1BQ8NB78 822 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 INPP5DQ92835 1189 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 NOTCH4Q99466 2003 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 TRIM31Q9BZY9 425 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 MYLK2Q9H1R3 596 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 TAF1DQ9H5J8 278 aaPredicted RBP3.74□□□□□ -1.81
USP48-215ENST00000534705 ZNF304Q9HCX3 659 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 KRCC1Q9NPI7 259 aaPredicted RBP3.74□□□□□ -1.81
USP48-215ENST00000534705 ZDHHC7Q9NXF8 308 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 KNSTRNQ9Y448 316 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 KCPQ6ZWJ8 1503 aa3.74□□□□□ -1.81
USP48-215ENST00000534705 PCDH11XQ9BZA7 1347 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 PCDH11YQ9BZA8 1340 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 GOLGB1Q14789 3259 aaKnown RBP3.73□□□□□ -1.81
USP48-215ENST00000534705 TAF1P21675 1872 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 UTRNP46939 3433 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 UNGP13051 313 aaPredicted RBP3.73□□□□□ -1.81
USP48-215ENST00000534705 CYP4B1P13584 511 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 ACP5P13686 325 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 RFX2P48378 723 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 AARSP49588 968 aaKnown RBP eCLIP3.73□□□□□ -1.81
USP48-215ENST00000534705 ACTR2P61160 394 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 PPATQ06203 517 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 FOXD4Q12950 439 aaPredicted RBP3.73□□□□□ -1.81
USP48-215ENST00000534705 EFR3AQ14156 821 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 POSTNQ15063 836 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 ODF3L2Q3SX64 289 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 HMBOX1Q6NT76 420 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 SYT13Q7L8C5 426 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 GPSM1Q86YR5 675 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 CAMK1DQ8IU85 385 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 ZDHHC23Q8IYP9 409 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 DPP10Q8N608 796 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 TMEM217Q8N7C4 229 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 GPATCH11Q8N954 259 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 SPATA5Q8NB90 893 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 RUBCNQ92622 972 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 ZNF419Q96HQ0 510 aaPredicted RBP3.73□□□□□ -1.81
USP48-215ENST00000534705 ZNF333Q96JL9 665 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 TEFMQ96QE5 360 aaKnown RBP3.73□□□□□ -1.81
USP48-215ENST00000534705 ISCA1Q9BUE6 129 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 CADM1Q9BY67 442 aaKnown RBP3.73□□□□□ -1.81
USP48-215ENST00000534705 CLPBQ9H078 707 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 RBM38Q9H0Z9 239 aaKnown RBP3.73□□□□□ -1.81
USP48-215ENST00000534705 HIPK3Q9H422 1215 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 KLHL31Q9H511 634 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 MRPL44Q9H9J2 332 aaKnown RBP3.73□□□□□ -1.81
USP48-215ENST00000534705 SIRT3Q9NTG7 399 aaPredicted RBP3.73□□□□□ -1.81
USP48-215ENST00000534705 KIF17Q9P2E2 1029 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 FBXO40Q9UH90 709 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 MYH3P11055 1940 aa3.73□□□□□ -1.81
USP48-215ENST00000534705 TCRBV7S3A2A0A539 114 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 IRAK2O43187 625 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 KIF1CO43896 1103 aaKnown RBP3.72□□□□□ -1.81
USP48-215ENST00000534705 DDAH2O95865 285 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 CSF1P09603 554 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 PPP2R1AP30153 589 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 TNFSF8P32971 234 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 GJC1P36383 396 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 RBM5P52756 815 aaKnown RBP eCLIP3.72□□□□□ -1.81
USP48-215ENST00000534705 ARL4CP56559 192 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 PDCLQ13371 301 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 PKP1Q13835 747 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 MAPRE1Q15691 268 aaKnown RBP3.72□□□□□ -1.81
USP48-215ENST00000534705 TIGD6Q17RP2 521 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 TMEM95Q3KNT9 176 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 ADCK5Q3MIX3 580 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 RUNDC3AQ59EK9 446 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 ANO1Q5XXA6 986 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 PDXDC1Q6P996 788 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 ZNF549Q6P9A3 640 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 GSG1LQ6UXU4 331 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 BRSK2Q8IWQ3 736 aa3.72□□□□□ -1.81
USP48-215ENST00000534705 VPS52Q8N1B4 723 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms