RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 CPSF4O95639 269 aaKnown RBP17.34■□□□□ 0.37
PHRF1-206ENST00000534320 VCLP18206 1134 aa17.34■□□□□ 0.37
PHRF1-206ENST00000534320 POLR2EP19388 210 aaKnown RBP17.34■□□□□ 0.37
PHRF1-206ENST00000534320 L1CAMP32004 1257 aa17.34■□□□□ 0.37
PHRF1-206ENST00000534320 FSTL1Q12841 308 aa17.34■□□□□ 0.37
PHRF1-206ENST00000534320 TBCELQ5QJ74 424 aa17.34■□□□□ 0.37
PHRF1-206ENST00000534320 CLEC4CQ8WTT0 213 aa17.34■□□□□ 0.37
PHRF1-206ENST00000534320 DEPDC7Q96QD5 511 aa17.34■□□□□ 0.37
PHRF1-206ENST00000534320 FAM126AQ9BYI3 521 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-206ENST00000534320 TMEM59LQ9UK28 342 aa17.34■□□□□ 0.37
PHRF1-206ENST00000534320 TNPO3Q9Y5L0 923 aaKnown RBP17.34■□□□□ 0.37
PHRF1-206ENST00000534320 CCDC154A6NI56 674 aa17.33■□□□□ 0.37
PHRF1-206ENST00000534320 PSMD12O00232 456 aaPredicted RBP17.33■□□□□ 0.37
PHRF1-206ENST00000534320 HDAC3O15379 428 aa17.33■□□□□ 0.37
PHRF1-206ENST00000534320 FCGR1AP12314 374 aa17.33■□□□□ 0.37
PHRF1-206ENST00000534320 CRHR1P34998 444 aa17.33■□□□□ 0.37
PHRF1-206ENST00000534320 SNRPD1P62314 119 aaKnown RBP17.33■□□□□ 0.37
PHRF1-206ENST00000534320 CREMQ03060 361 aa17.33■□□□□ 0.37
PHRF1-206ENST00000534320 LRRC74BQ6ZQY2 392 aa17.33■□□□□ 0.37
PHRF1-206ENST00000534320 RTL3Q8N8U3 475 aaKnown RBP17.33■□□□□ 0.37
PHRF1-206ENST00000534320 GBA3Q9H227 469 aa17.33■□□□□ 0.37
PHRF1-206ENST00000534320 STN1Q9H668 368 aaKnown RBP17.33■□□□□ 0.37
PHRF1-206ENST00000534320 OPTCQ9UBM4 332 aa17.33■□□□□ 0.37
PHRF1-206ENST00000534320 FZD10Q9ULW2 581 aa17.33■□□□□ 0.37
PHRF1-206ENST00000534320 E9PAM4 449 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 MAP3K13O43283 966 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 SEC22BO75396 215 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 LYPLA1O75608 230 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-206ENST00000534320 AP2A1O95782 977 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 CCT3P49368 545 aaKnown RBP17.33■□□□□ 0.36
PHRF1-206ENST00000534320 PTPRNQ16849 979 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 TAC4Q86UU9 113 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 ZNF567Q8N184 647 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 SPATA6LQ8N4H0 392 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 FAM120BQ96EK7 910 aaKnown RBP17.33■□□□□ 0.36
PHRF1-206ENST00000534320 MAGED4Q96JG8 741 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 BPIFA1Q9NP55 256 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 ASAH2Q9NR71 780 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 DOLKQ9UPQ8 538 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 HTR7P34969 479 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 ACOX1Q15067 660 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 TARBP2Q15633 366 aaKnown RBP17.33■□□□□ 0.36
PHRF1-206ENST00000534320 CA9Q16790 459 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 KLHL12Q53G59 568 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 DIS3LQ8TF46 1054 aaKnown RBP17.33■□□□□ 0.36
PHRF1-206ENST00000534320 MED8Q96G25 268 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 ZCCHC2Q9C0B9 1178 aaKnown RBP17.33■□□□□ 0.36
PHRF1-206ENST00000534320 GRK4P32298 578 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 ATXN1P54253 815 aaKnown RBP17.33■□□□□ 0.36
PHRF1-206ENST00000534320 TDRPQ86YL5 185 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 BTN2A2Q8WVV5 523 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 DEFB118Q96PH6 123 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 IMPAD1Q9NX62 359 aa17.33■□□□□ 0.36
PHRF1-206ENST00000534320 COL2A1P02458 1487 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-206ENST00000534320 KPNA3O00505 521 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-206ENST00000534320 SLC25A3Q00325 362 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 LRRC8DQ7L1W4 858 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 TRMT11Q7Z4G4 463 aaKnown RBP17.32■□□□□ 0.36
PHRF1-206ENST00000534320 FAM126BQ8IXS8 530 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 CFAP52Q8N1V2 620 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 GDPD5Q8WTR4 605 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 SLCO2A1Q92959 643 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 SERAC1Q96JX3 654 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 CORO1BQ9BR76 489 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 HIPK3Q9H422 1215 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 TRIM39Q9HCM9 518 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 THG1LQ9NWX6 298 aaKnown RBP17.32■□□□□ 0.36
PHRF1-206ENST00000534320 PNMA8CA0A1B0GUJ8 204 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 PSMG1O95456 288 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 SERPINA6P08185 405 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 PIK3CGP48736 1102 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 CRY1Q16526 586 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 SAMD4BQ5PRF9 694 aaKnown RBP17.32■□□□□ 0.36
PHRF1-206ENST00000534320 SLC9A7Q96T83 725 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 BCO2Q9BYV7 579 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 AGO3Q9H9G7 860 aaKnown RBP17.32■□□□□ 0.36
PHRF1-206ENST00000534320 RNPEPL1Q9HAU8 725 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 LBPP18428 481 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 LPOP22079 712 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-206ENST00000534320 CES1P23141 567 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 CCNCP24863 283 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 IL1R2P27930 398 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 IL27RAQ6UWB1 636 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 TRPC4APQ8TEL6 797 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 ATP13A3Q9H7F0 1226 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 PCDH8O95206 1070 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 C2P06681 752 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 RHOQP17081 205 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 PREPLQ4J6C6 727 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-206ENST00000534320 ZFP1Q6P2D0 407 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 SYTL1Q8IYJ3 562 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 SLC35B2Q8TB61 432 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 WDR41Q9HAD4 459 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 ARL15Q9NXU5 204 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 STK39Q9UEW8 545 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 ZNF180Q9UJW8 692 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 ADAM30Q9UKF2 790 aa17.32■□□□□ 0.36
PHRF1-206ENST00000534320 UNCXA6NJT0 531 aa17.31■□□□□ 0.36
PHRF1-206ENST00000534320 YJEFN3A6XGL0 299 aa17.31■□□□□ 0.36
PHRF1-206ENST00000534320 F8W810 466 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms