RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979		A8MXE2	369 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	FAM90A23P	A8MXZ1	464 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	PRY	O14603	147 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	HNRNPR	O43390	633 aa	Known RBP	4.89	□□□□□ -1.63
ATM-223	ENST00000533979	OAZ2	O95190	189 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	WEE2	P0C1S8	567 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	IFNAR1	P17181	557 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	DRD1	P21728	446 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	PRKCH	P24723	683 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	GSTM5	P46439	218 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	CTCF	P49711	727 aa	Predicted RBP	4.89	□□□□□ -1.63
ATM-223	ENST00000533979	VPS41	P49754	854 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	ZNF41	P51814	821 aa	Predicted RBP	4.89	□□□□□ -1.63
ATM-223	ENST00000533979	CDH15	P55291	814 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	RPL7A	P62424	266 aa	Known RBP	4.89	□□□□□ -1.63
ATM-223	ENST00000533979	TMF1	P82094	1093 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	GAB1	Q13480	694 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	BFSP2	Q13515	415 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	COG2	Q14746	738 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	MED22	Q15528	200 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	MMEL1	Q495T6	779 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	GLE1	Q53GS7	698 aa	Known RBP	4.89	□□□□□ -1.63
ATM-223	ENST00000533979	TCP11X2	Q5H9J9	407 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	ZNF766	Q5HY98	468 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.89	□□□□□ -1.63
ATM-223	ENST00000533979	CCDC91	Q7Z6B0	441 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	EPHX4	Q8IUS5	362 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.89	□□□□□ -1.63
ATM-223	ENST00000533979	OR4N4	Q8N0Y3	316 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	MMP21	Q8N119	569 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979		Q8NFD4	153 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
ATM-223	ENST00000533979	KIF1BP	Q96EK5	621 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	PIP5K1A	Q99755	562 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	HGH1	Q9BTY7	390 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	TUBB6	Q9BUF5	446 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	MAK16	Q9BXY0	300 aa	Known RBP	4.89	□□□□□ -1.63
ATM-223	ENST00000533979	SMARCAD1	Q9H4L7	1026 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	EBF3	Q9H4W6	596 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	MROH8	Q9H579	483 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	CCDC134	Q9H6E4	229 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	PCDHB16	Q9NRJ7	776 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	TMEM45A	Q9NWC5	275 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	HCN3	Q9P1Z3	774 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	C5AR2	Q9P296	337 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	LIMA1	Q9UHB6	759 aa	Known RBP	4.89	□□□□□ -1.63
ATM-223	ENST00000533979	SLCO3A1	Q9UIG8	710 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	TMCC3	Q9ULS5	477 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	PCDHB2	Q9Y5E7	798 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	KCNE2	Q9Y6J6	123 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	TNIK	Q9UKE5	1360 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	NCOA1	Q15788	1441 aa		4.89	□□□□□ -1.63
ATM-223	ENST00000533979	ARAP3	Q8WWN8	1544 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	CCDC187	A0A096LP49	1063 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	GOLGA6L10	A0A0M3HER8	536 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	ENTPD3	O75355	529 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	GOSR1	O95249	250 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	METTL18	O95568	372 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	CYP19A1	P11511	503 aa	Predicted RBP	4.88	□□□□□ -1.63
ATM-223	ENST00000533979	ACP5	P13686	325 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	CHN1	P15882	459 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	EEF1D	P29692	281 aa	Known RBP	4.88	□□□□□ -1.63
ATM-223	ENST00000533979	PPARG	P37231	505 aa	Predicted RBP	4.88	□□□□□ -1.63
ATM-223	ENST00000533979	THPO	P40225	353 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	HNF4A	P41235	474 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	AGTR2	P50052	363 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	FAM3B	P58499	235 aa	Predicted RBP	4.88	□□□□□ -1.63
ATM-223	ENST00000533979	NEXN	Q0ZGT2	675 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	MTA1	Q13330	715 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	IRF3	Q14653	427 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	ADIPOQ	Q15848	244 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	TTC31	Q49AM3	519 aa	Predicted RBP	4.88	□□□□□ -1.63
ATM-223	ENST00000533979	ZNF569	Q5MCW4	686 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	NCEH1	Q6PIU2	408 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	DCLRE1A	Q6PJP8	1040 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	KYAT3	Q6YP21	454 aa	Known RBP	4.88	□□□□□ -1.63
ATM-223	ENST00000533979	PIK3AP1	Q6ZUJ8	805 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	ERC1	Q8IUD2	1116 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	SCN4B	Q8IWT1	228 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	LAS2	Q8IYD9	372 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	ADGRF2	Q8IZF7	708 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	NUP93	Q8N1F7	819 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	RFWD2	Q8NHY2	731 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	RUFY2	Q8WXA3	655 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	SAAL1	Q96ER3	474 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	REXO5	Q96IC2	774 aa	Known RBP	4.88	□□□□□ -1.63
ATM-223	ENST00000533979	SPAG5	Q96R06	1193 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	PIGS	Q96S52	555 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	ASNSD1	Q9NWL6	643 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	TAB2	Q9NYJ8	693 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	MRPL15	Q9P015	296 aa	Known RBP	4.88	□□□□□ -1.63
ATM-223	ENST00000533979	WDR35	Q9P2L0	1181 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	SUFU	Q9UMX1	484 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	PA2G4	Q9UQ80	394 aa	Known RBP	4.88	□□□□□ -1.63
ATM-223	ENST00000533979	KNSTRN	Q9Y448	316 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	UACA	Q9BZF9	1416 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	PRX	Q9BXM0	1461 aa		4.88	□□□□□ -1.63
ATM-223	ENST00000533979	SLC22A23	A1A5C7	686 aa		4.87	□□□□□ -1.63
ATM-223	ENST00000533979	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.87	□□□□□ -1.63
ATM-223	ENST00000533979		A8MV72	311 aa	Predicted RBP	4.87	□□□□□ -1.63

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