RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TAC4Q86UU9 113 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 HASPINQ8TF76 798 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 FBRSL1Q9HCM7 1045 aaKnown RBP19.49■□□□□ 0.71
CAPN1-226ENST00000533820 TTC24A2A3L6 582 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-226ENST00000533820 C7orf72A4D263 438 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 PTGESO14684 152 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 XPOTO43592 962 aaKnown RBP19.49■□□□□ 0.71
CAPN1-226ENST00000533820 TNFAIP8O95379 198 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 YWHAQP27348 245 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 UBXN11Q5T124 520 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 KLHL35Q6PF15 583 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 BNIPLQ7Z465 357 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 GPR78Q96P69 363 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 PAAF1Q9BRP4 392 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 MCMBPQ9BTE3 642 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 FSD1LQ9BXM9 530 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 CAAP1Q9H8G2 361 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 NCKIPSDQ9NZQ3 722 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 SPO11Q9Y5K1 396 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 ERI2A8K979 691 aaKnown RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 TARM1B6A8C7 271 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 NCAM2O15394 837 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 MSI1O43347 362 aaKnown RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 GPC4O75487 556 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 RXRGP48443 463 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 ZFP1Q6P2D0 407 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 DIS3LQ8TF46 1054 aaKnown RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 LPGAT1Q92604 370 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 TMIGD2Q96BF3 282 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 KIFC1Q9BW19 673 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 MRPL46Q9H2W6 279 aaKnown RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 ZNF385DQ9H6B1 395 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 VTI1BQ9UEU0 232 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 GIMAP2Q9UG22 337 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 RAB26Q9ULW5 256 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 ANKRD6Q9Y2G4 727 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 PRSS51A0A1B0GVH4 220 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 CASTOR2A6NHX0 329 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 WARSP23381 471 aaKnown RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 PRAMEP78395 509 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 MGAT5BQ3V5L5 792 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 MTX3Q5HYI7 312 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 FASTKD5Q7L8L6 764 aaKnown RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 ATPAF2Q8N5M1 289 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 SMG8Q8ND04 991 aaKnown RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 ADCY4Q8NFM4 1077 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 ERLEC1Q96DZ1 483 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 SLC45A3Q96JT2 553 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 AP4S1Q9Y587 144 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 LTBP3Q9NS15 1303 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 TPST1O60507 370 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 CKMT2P17540 419 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 FASTKQ14296 549 aaKnown RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 PCID2Q5JVF3 399 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 RYBPQ8N488 228 aaPredicted RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 CPSF7Q8N684 471 aaKnown RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 TMEM102Q8N9M5 508 aaPredicted RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 GAD1Q99259 594 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 SLC29A1Q99808 456 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 TRIM8Q9BZR9 551 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 DNAI2Q9GZS0 605 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 NOL11Q9H8H0 719 aaKnown RBP19.48■□□□□ 0.71
CAPN1-226ENST00000533820 EPS15L1Q9UBC2 864 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 KCNH4Q9UQ05 1017 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 PCDHGA7Q9Y5G6 932 aa19.48■□□□□ 0.71
CAPN1-226ENST00000533820 SBF1O95248 1867 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 CROCCQ5TZA2 2017 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 PIM1P11309 404 aaPredicted RBP19.47■□□□□ 0.71
CAPN1-226ENST00000533820 PSMC3P17980 439 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 BDNFP23560 247 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 RGS2P41220 211 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 CLCNKBP51801 687 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 SETD3Q86TU7 594 aaPredicted RBP19.47■□□□□ 0.71
CAPN1-226ENST00000533820 SCAMP5Q8TAC9 235 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 HMGCLL1Q8TB92 370 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 RDH11Q8TC12 318 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 KCTD13Q8WZ19 329 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 KATNBL1Q9H079 304 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 MPP6Q9NZW5 540 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 FBXO5Q9UKT4 447 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 PRORSD1PA6NEY8 169 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 CDH15P55291 814 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 ITKQ08881 620 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 PPIL2Q13356 520 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 DUSP28Q4G0W2 176 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 TMEM259Q4ZIN3 620 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 B3GNT6Q6ZMB0 384 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 C3orf58Q8NDZ4 430 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 NTAN1Q96AB6 310 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 SFMBT1Q9UHJ3 866 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 BCAP29Q9UHQ4 241 aa19.47■□□□□ 0.71
CAPN1-226ENST00000533820 TRIM38O00635 465 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 MTSS1O43312 755 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 TIPRLO75663 272 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 CDH13P55290 713 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 MAXP61244 160 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 PPHLN1Q8NEY8 458 aaKnown RBP19.46■□□□□ 0.71
CAPN1-226ENST00000533820 OLFM1Q99784 485 aa19.46■□□□□ 0.71
CAPN1-226ENST00000533820 RBM22Q9NW64 420 aaKnown RBP eCLIP19.46■□□□□ 0.71
CAPN1-226ENST00000533820 PTGDR2Q9Y5Y4 395 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms