RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 EPOP01588 193 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 ATP5BP06576 529 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 POLBP06746 335 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 CISD3P0C7P0 127 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 HLA-FP30511 346 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 GRIA2P42262 883 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 MAGEA3P43357 314 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 SLC6A11P48066 632 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 SERPINH1P50454 418 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 RHOAP61586 193 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 SIGLEC14Q08ET2 396 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 GRSF1Q12849 480 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 KYNUQ16719 465 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 FSCBQ5H9T9 825 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 CEP85LQ5SZL2 805 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 KCTD11Q693B1 232 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 C12orf40Q86WS4 652 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 SIX5Q8N196 739 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 RIBC1Q8N443 379 aaPredicted RBP11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 SVOPQ8N4V2 548 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 TSEN2Q8NCE0 465 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 IPMKQ8NFU5 416 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 CDKL2Q92772 493 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 CHFRQ96EP1 664 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 STAMBPL1Q96FJ0 436 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 C9orf72Q96LT7 481 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 ZIM3Q96PE6 472 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 SEMA3CQ99985 751 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 ADGRE3Q9BY15 652 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 ABCB8Q9NUT2 735 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 NINJ2Q9NZG7 142 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 FETUBQ9UGM5 382 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 VPS51Q9UID3 782 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 GGA2Q9UJY4 613 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 CLEC4EQ9ULY5 219 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 TEX264Q9Y6I9 313 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 IKBKGQ9Y6K9 419 aa11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 NYNRINQ9P2P1 1898 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 MYO18AQ92614 2054 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-218ENST00000533761 EXOC1LA0A1B0GW35 172 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 INSIG1O15503 277 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 SASH3O75995 380 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 TMCC1O94876 653 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 ASLP04424 464 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 APODP05090 189 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 PABPC1P11940 636 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 PGAM1P18669 254 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 PAMP19021 973 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 POLR2EP19388 210 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 HLA-DPA1P20036 260 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 DRD1P21728 446 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 MZF1P28698 734 aaPredicted RBP11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 ELK3P41970 407 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 CD86P42081 329 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 STARD6P59095 220 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 AP1S1P61966 158 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 SH3BP2P78314 561 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 ARF5P84085 180 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 RAD51Q06609 339 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 LMAN2Q12907 356 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 GRM3Q14832 879 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 KCTD19Q17RG1 926 aaPredicted RBP11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 KRT71Q3SY84 523 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 TMEM196Q5HYL7 178 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 PITRM1Q5JRX3 1037 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 FNBP1LQ5T0N5 605 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 SYCP2LQ5T4T6 812 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 ZNF449Q6P9G9 518 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 TXNDC11Q6PKC3 985 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 C3orf62Q6ZUJ4 267 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 CAND1Q86VP6 1230 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 KRT222Q8N1A0 295 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 TERB1Q8NA31 727 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 NUDCD1Q96RS6 583 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 CYTH2Q99418 400 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 EBNA1BP2Q99848 306 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 TMEM109Q9BVC6 243 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 CEP44Q9C0F1 390 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 CASS4Q9NQ75 786 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 CHMP2BQ9UQN3 213 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 OR51B4Q9Y5P0 310 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 TTC28Q96AY4 2481 aa11.04□□□□□ -0.64
CCDC90B-218ENST00000533761 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 KANSL1LA0AUZ9 987 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 KRBA1A5PL33 1030 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 F5H423 210 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 RASGRF2O14827 1237 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 CDH16O75309 829 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 PMPCBO75439 489 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 TCEA3O75764 348 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 IGSF6O95976 241 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 FGF1P05230 155 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 JUNDP17535 347 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 CD70P32970 193 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 TNFRSF4P43489 277 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 RECQLP46063 649 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 SCNN1BP51168 640 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 WNT3AP56704 352 aa11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 SESN2P58004 480 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-218ENST00000533761 SNRPD1P62314 119 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms