RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 PMS2CLQ68D20 193 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 LPCAT2Q7L5N7 544 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 TTC7BQ86TV6 843 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 C12orf50Q8NA57 414 aaPredicted RBP16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 FOXJ1Q92949 421 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 GPR174Q9BXC1 333 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 TDRD1Q9BXT4 1180 aaKnown RBP16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 GBA3Q9H227 469 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 VPS45Q9NRW7 570 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 PHTF1Q9UMS5 762 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 FADS3Q9Y5Q0 445 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 METTL12A8MUP2 240 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 UPK3BL1B0FP48 263 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 UPK3BL2E5RIL1 263 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 KIF2AO00139 706 aaPredicted RBP16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 AREL1O15033 823 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 XPAP23025 273 aaPredicted RBP16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 ABL2P42684 1182 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 RPL26P61254 145 aaKnown RBP16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 SNX1Q13596 522 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 FAM182AQ5T1J6 154 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 ZSCAN30Q86W11 494 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 ZSWIM9Q86XI8 627 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 CCDC110Q8TBZ0 833 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 LOXL4Q96JB6 756 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 C16orf45Q96MC5 204 aaPredicted RBP16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 PPP1R2P1Q96PQ5 205 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 RBM15Q96T37 977 aaKnown RBP eCLIP16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 SMARCAL1Q9NZC9 954 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 FAM153AQ9UHL3 310 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 RSPH14Q9UHP6 348 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 RPL26L1Q9UNX3 145 aaKnown RBP16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 PPIL1Q9Y3C6 166 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 PCDHB9Q9Y5E1 797 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 EML5Q05BV3 1969 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 FANCMQ8IYD8 2048 aa16.58■□□□□ 0.24
PACSIN3-210ENST00000533686 WDFY4Q6ZS81 3184 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TBC1D3DA0A087WVF3 549 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TBC1D3IA0A087WXS9 549 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TBC1D3EA0A087X179 549 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TBC1D3KA0A087X1G2 549 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 GOLGA6L10A0A0M3HER8 536 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TBC1D3FA6NER0 549 aaPredicted RBP16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TBC1D3LB9A6J9 549 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 PROB1E7EW31 1015 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TSPAN6O43657 245 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 ANXA9O76027 345 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 CPP00450 1065 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TBC1D3HP0C7X1 549 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 NFKBIAP25963 317 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 CCR5P51681 352 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 GDF10P55107 478 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 ELP6Q0PNE2 266 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 MPP3Q13368 585 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 PARP6Q2NL67 630 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 KIAA0895LQ68EN5 471 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TBC1D3GQ6DHY5 549 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TBC1D3CQ6IPX1 549 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 PRR23BQ6ZRT6 265 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TRIM69Q86WT6 500 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TMEFF1Q8IYR6 380 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 TBC1D3Q8IZP1 549 aaPredicted RBP16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 NDUFAF2Q8N183 169 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 PAF1Q8N7H5 531 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 ATL2Q8NHH9 583 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 SPATA22Q8NHS9 363 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 PDCD6IPQ8WUM4 868 aaKnown RBP16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 PIH1D2Q8WWB5 315 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 MAGOHBQ96A72 148 aaKnown RBP16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 AP1M1Q9BXS5 423 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 C6orf106Q9H6K1 298 aaPredicted RBP16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 PCDH9Q9HC56 1237 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 RAB23Q9ULC3 237 aa16.57■□□□□ 0.24
PACSIN3-210ENST00000533686 RIOK3O14730 519 aaKnown RBP16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 SPINT1O43278 529 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 MT-CYBP00156 380 aaPredicted RBP16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 PRLP01236 227 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 EPOP01588 193 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 PDHA1P08559 390 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 PAFAH1B1P43034 410 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 LMNB2Q03252 620 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 CDK18Q07002 472 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 PRPSAP1Q14558 356 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 TMEM52BQ4KMG9 183 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 ERAP2Q6P179 960 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 KDELC1Q6UW63 502 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 ARHGEF18Q6ZSZ5 1173 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 SLC41A1Q8IVJ1 513 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 KLHDC8BQ8IXV7 354 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 SUMF1Q8NBK3 374 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 OXNAD1Q96HP4 312 aaPredicted RBP16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 FEM1CQ96JP0 617 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 CAPZA3Q96KX2 299 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 TRIB3Q96RU7 358 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 PCDH12Q9NPG4 1184 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 FAM86C1Q9NVL1 165 aa16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 SMG5Q9UPR3 1016 aaKnown RBP16.56■□□□□ 0.24
PACSIN3-210ENST00000533686 CHKBQ9Y259 395 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms