RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 SLC7A4O43246 635 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 SPINT1O43278 529 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 SOCS5O75159 536 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 RNASEH2AO75792 299 aaKnown RBP12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 RPP40O75818 363 aaKnown RBP12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 ZNF189O75820 626 aaPredicted RBP12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 ITGAVP06756 1048 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 CD6P30203 668 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 OXTRP30559 389 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 PTPN5P54829 565 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 BCL2L1Q07817 233 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 ITKQ08881 620 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 SNX1Q13596 522 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 ANKRD20A2Q5SQ80 823 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 ANKRD20A1Q5TYW2 823 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 ANKRD20A3Q5VUR7 823 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 PID1Q7Z2X4 250 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 KLHDC8BQ8IXV7 354 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 FAM71DQ8N9W8 422 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 C12orf50Q8NA57 414 aaPredicted RBP12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 TOE1Q96GM8 510 aaKnown RBP12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 SPATA13Q96N96 652 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 FCRL5Q96RD9 977 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 AP1M1Q9BXS5 423 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 R4GN57 208 aa12.84□□□□□ -0.35
RPUSD4-208ENST00000533628 CFAP69A5D8W1 941 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 GCATO75600 419 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 PRLP01236 227 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 NFKB1P19838 968 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 SERPINA4P29622 427 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 STIP1P31948 543 aaKnown RBP12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 ABL2P42684 1182 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 SFSWAPQ12872 951 aaKnown RBP12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 TTC27Q6P3X3 843 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 FAM124AQ86V42 546 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 CCDC110Q8TBZ0 833 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 PPP1R16AQ96I34 528 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 NAP1L3Q99457 506 aaPredicted RBP12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 OMDQ99983 421 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 TACO1Q9BSH4 297 aaKnown RBP12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 SGK2Q9HBY8 427 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 HOMER3Q9NSC5 361 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 HAUS2Q9NVX0 235 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 NCKAP1Q9Y2A7 1128 aa12.83□□□□□ -0.36
RPUSD4-208ENST00000533628 AREL1O15033 823 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 PLRG1O43660 514 aaKnown RBP12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 NEBLO76041 1014 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 SEC31AO94979 1220 aaKnown RBP12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 ADRB3P13945 408 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 CD86P42081 329 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 KCNJ1P48048 391 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 NEK3P51956 506 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 ADPRHP54922 357 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 KDELC1Q6UW63 502 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 GLIS1Q8NBF1 620 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 SPATA22Q8NHS9 363 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 OXNAD1Q96HP4 312 aaPredicted RBP12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 ZC3H10Q96K80 434 aaKnown RBP12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 RBM15Q96T37 977 aaKnown RBP eCLIP12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 TDRD1Q9BXT4 1180 aaKnown RBP12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 BTBD1Q9H0C5 482 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 DUSP15Q9H1R2 295 aaPredicted RBP12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 GBA3Q9H227 469 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 TTLL3Q9Y4R7 772 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 RAI2Q9Y5P3 530 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 FADS3Q9Y5Q0 445 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 NUMA1Q14980 2115 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 OPHN1O60890 802 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 PGLSO95336 258 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 MT-CYBP00156 380 aaPredicted RBP12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 PDHA1P08559 390 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 SERPINF2P08697 491 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 ITIH2P19823 946 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 BRAT1Q6PJG6 821 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 SLC36A4Q6YBV0 504 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 GANCQ8TET4 914 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 PIH1D2Q8WWB5 315 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 SPACA7Q96KW9 195 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 CAPZA3Q96KX2 299 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 TRIB3Q96RU7 358 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 IRF2BPLQ9H1B7 796 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 ZNF148Q9UQR1 794 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 PPIL1Q9Y3C6 166 aa12.82□□□□□ -0.36
RPUSD4-208ENST00000533628 AP1G1O43747 822 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 ETS1P14921 441 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 UGP2Q16851 508 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 P3H1Q32P28 736 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 PLK5Q496M5 336 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 PRUNE1Q86TP1 453 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 MAGOHBQ96A72 148 aaKnown RBP12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 RAB7BQ96AH8 199 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 FERMT1Q9BQL6 677 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 MLPHQ9BV36 600 aaPredicted RBP12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 GPR174Q9BXC1 333 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 EPC1Q9H2F5 836 aa12.81□□□□□ -0.36
RPUSD4-208ENST00000533628 KDM4CQ9H3R0 1056 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms