RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 NEBLO76041 1014 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 PRLRP16471 622 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 AKT2P31751 481 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 SLC1A1P43005 524 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 RPIAP49247 311 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 SPIDRQ14159 915 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 PIGHQ14442 188 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 NR0B2Q15466 257 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 TGIF1Q15583 401 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 IGFBP7Q16270 282 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 SKIDA1Q1XH10 827 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 NUGGCQ68CJ6 796 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 NEK5Q6P3R8 708 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 SLC26A9Q7LBE3 791 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 PTRH1Q86Y79 214 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 JAMLQ86YT9 394 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 FBXO39Q8N4B4 442 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 UBE2Q2Q8WVN8 375 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 NAT6Q93015 286 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 CNGB3Q9NQW8 809 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 ANAPC2Q9UJX6 822 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 SNX12Q9UMY4 172 aa11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 PACSIN2Q9UNF0 486 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-213ENST00000533149 SPTAN1Q13813 2472 aaKnown RBP11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 C2CD4BA6NLJ0 364 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 DDX3YO15523 660 aaKnown RBP11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 SRGAP2O75044 1071 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 GLI1P08151 1106 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 PDGFRAP16234 1089 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 GPD1P21695 349 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 PSMA2P25787 234 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 SLC6A4P31645 630 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 MAN1A1P33908 653 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 CTSOP43234 321 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 DNA2P51530 1060 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 DAOAP59103 153 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 CCDC15Q0P6D6 951 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 TUBB2AQ13885 445 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 CLCA4Q14CN2 919 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 AGBL4Q5VU57 503 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 TRNP1Q6NT89 227 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 ARCQ7LC44 396 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 SCML4Q8N228 414 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 CARNMT1Q8N4J0 409 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 ZNF548Q8NEK5 533 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 OR13H1Q8NG92 308 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 FNIP1Q8TF40 1166 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 OR8D1Q8WZ84 308 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 GLMNQ92990 594 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 AZIN2Q96A70 460 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 HES6Q96HZ4 224 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 MYOCQ99972 504 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 TUBB2BQ9BVA1 445 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 STRADBQ9C0K7 418 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 ABCC13Q9NSE7 274 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 ASNSD1Q9NWL6 643 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 PCDHB11Q9Y5F2 797 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 SAR1BQ9Y6B6 198 aa11.5□□□□□ -0.57
TRAPPC4-213ENST00000533149 NOTCH2Q04721 2471 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 COL27A1Q8IZC6 1860 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 GOLGA6L7A0A1B0GV03 622 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 A6NNZ2 444 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 MIF4GDA9UHW6 222 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 C1QTNF3-AMACRE9PGA6 284 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 TPP1O14773 563 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 NVLO15381 856 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 SART1O43290 800 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 MSI1O43347 362 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 ACSL4O60488 711 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 HSF2BPO75031 334 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 CSF2P04141 144 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 HNRNPA2B1P22626 353 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 CTNNA2P26232 953 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 UGT1A5P35504 534 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 FLT3P36888 993 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 SSR1P43307 286 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 ZNF143P52747 638 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 PDX1P52945 283 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 TAS2R40P59535 323 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 YWHAZP63104 245 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 CNTN1Q12860 1018 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 SRSF6Q13247 344 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 CCDC14Q49A88 953 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 FAM133BQ5BKY9 247 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 ZNF542PQ5EBM4 170 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 BSPRYQ5W0U4 402 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 CRTC1Q6UUV9 634 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 RAB11FIP2Q7L804 512 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 ABI3BPQ7Z7G0 1075 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 DEFB106AQ8N104 65 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 ARFGAP1Q8N6T3 406 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 NIPA2Q8N8Q9 360 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 IRGQQ8WZA9 623 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 EDEM1Q92611 657 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 KRT35Q92764 455 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 FAM149B1Q96BN6 582 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 RPL10LQ96L21 214 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 OSBPL9Q96SU4 736 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 IL12RB2Q99665 862 aa11.49□□□□□ -0.57
TRAPPC4-213ENST00000533149 CNPY3Q9BT09 278 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms