RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TRIM5Q9C035 493 aa30.58■■■□□ 2.49
SSSCA1-207ENST00000533115 MAP1BP46821 2468 aaKnown RBP30.58■■■□□ 2.49
SSSCA1-207ENST00000533115 FRYQ5TBA9 3013 aa30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 MAFKO60675 156 aa30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 SDC3O75056 442 aa30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 TM7SF2O76062 418 aa30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 LDOC1O95751 146 aaPredicted RBP30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 RABIFP47224 123 aa30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 TAS2R40P59535 323 aa30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 DPYSL3Q14195 570 aa30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 UNQ6494/PRO21346Q6UXR6 183 aa30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 ATPAF2Q8N5M1 289 aa30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 IFT43Q96FT9 208 aa30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 CNDP2Q96KP4 475 aaKnown RBP30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 WRAP53Q9BUR4 548 aaKnown RBP30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 PCDH12Q9NPG4 1184 aa30.57■■■□□ 2.48
SSSCA1-207ENST00000533115 C1QTNF9BB2RNN3 333 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 PEX11BO96011 259 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 C1QTNF9P0C862 333 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 MAN1A1P33908 653 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 SCNN1BP51168 640 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 BCL2L1Q07817 233 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 ZNF235Q14590 738 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 ERAP2Q6P179 960 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 ZSWIM9Q86XI8 627 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 KCTD6Q8NC69 237 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 SLC35G2Q8TBE7 412 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 CENPTQ96BT3 561 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 TMEM121BQ9BXQ6 578 aaPredicted RBP30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 AKAP13Q12802 2813 aa30.56■■■□□ 2.48
SSSCA1-207ENST00000533115 ENC1O14682 589 aa30.55■■■□□ 2.48
SSSCA1-207ENST00000533115 KRT7P08729 469 aa30.55■■■□□ 2.48
SSSCA1-207ENST00000533115 AP1S1P61966 158 aa30.55■■■□□ 2.48
SSSCA1-207ENST00000533115 PDK2Q15119 407 aa30.55■■■□□ 2.48
SSSCA1-207ENST00000533115 GATA6Q92908 595 aa30.55■■■□□ 2.48
SSSCA1-207ENST00000533115 C1QTNF7Q9BXJ2 289 aa30.55■■■□□ 2.48
SSSCA1-207ENST00000533115 SPTY2D1-AS1A0A0U1RR47 76 aa30.54■■■□□ 2.48
SSSCA1-207ENST00000533115 TMEM110-MUSTN1A8MSY1 372 aa30.54■■■□□ 2.48
SSSCA1-207ENST00000533115 RIOK3O14730 519 aaKnown RBP30.54■■■□□ 2.48
SSSCA1-207ENST00000533115 DGKAP23743 735 aa30.54■■■□□ 2.48
SSSCA1-207ENST00000533115 HSPA9P38646 679 aaKnown RBP30.54■■■□□ 2.48
SSSCA1-207ENST00000533115 MESDQ14696 234 aa30.54■■■□□ 2.48
SSSCA1-207ENST00000533115 MAP7D3Q8IWC1 876 aa30.54■■■□□ 2.48
SSSCA1-207ENST00000533115 SLC25A45Q8N413 288 aa30.54■■■□□ 2.48
SSSCA1-207ENST00000533115 ECHDC3Q96DC8 303 aa30.54■■■□□ 2.48
SSSCA1-207ENST00000533115 ZNF670Q9BS34 389 aa30.54■■■□□ 2.48
SSSCA1-207ENST00000533115 ATP8A1Q9Y2Q0 1164 aa30.54■■■□□ 2.48
SSSCA1-207ENST00000533115 PROS1P07225 676 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 PFN3P60673 137 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 PDE1CQ14123 709 aaPredicted RBP30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 FZD2Q14332 565 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 ANKRD20A8PQ5CZ79 823 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 LRRC49Q8IUZ0 686 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 BBS5Q8N3I7 341 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 PCDH19Q8TAB3 1148 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 NSMCE1Q8WV22 266 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 NSMCE3Q96MG7 304 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 DNAJC28Q9NX36 388 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 ANKRD36A6QL64 1941 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 ASPMQ8IZT6 3477 aa30.53■■■□□ 2.48
SSSCA1-207ENST00000533115 TRAFD1O14545 582 aaPredicted RBP30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 IGFALSP35858 605 aa30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 MMP12P39900 470 aa30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 ARHGAP25P42331 645 aa30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 PAFAH1B3Q15102 231 aaKnown RBP30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 ST3GAL2Q16842 350 aa30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 CCDC157Q569K6 752 aa30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 NCBP2-AS2Q69YL0 99 aa30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 KDM7AQ6ZMT4 941 aa30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 RHOT2Q8IXI1 618 aa30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 PGBD5Q8N414 524 aa30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 TP53I13Q8NBR0 393 aaPredicted RBP30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 UCKL1Q9NWZ5 548 aa30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 ARID1BQ8NFD5 2236 aaPredicted RBP30.52■■■□□ 2.48
SSSCA1-207ENST00000533115 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 TTC24A2A3L6 582 aaPredicted RBP30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 MFSD11O43934 449 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 PIAS2O75928 621 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 MTA2O94776 668 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 PRKCGP05129 697 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 CR2P20023 1033 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 POLR2LP62875 67 aaKnown RBP30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 DNAJC3Q13217 504 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 ZNF542PQ5EBM4 170 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 TPRG1LQ5T0D9 272 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 MARC1Q5VT66 337 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 PARGQ86W56 976 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 PAF1Q8N7H5 531 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 NUDCD1Q96RS6 583 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 MGME1Q9BQP7 344 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 CAAP1Q9H8G2 361 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 MBNL1Q9NR56 388 aaKnown RBP30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 COQ6Q9Y2Z9 468 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 PCDHGA1Q9Y5H4 931 aa30.51■■■□□ 2.47
SSSCA1-207ENST00000533115 CSF2P04141 144 aa30.5■■■□□ 2.47
SSSCA1-207ENST00000533115 C6P13671 934 aa30.5■■■□□ 2.47
SSSCA1-207ENST00000533115 LIG3P49916 1009 aa30.5■■■□□ 2.47
SSSCA1-207ENST00000533115 HNRNPKP61978 463 aaKnown RBP eCLIP30.5■■■□□ 2.476e-6■■■□□ 16.3
SSSCA1-207ENST00000533115 YPEL5P62699 121 aa30.5■■■□□ 2.47
SSSCA1-207ENST00000533115 ZFYVE27Q5T4F4 411 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms