RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 FAM87AP0C7U9 286 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 HGFP14210 728 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 RHOQP17081 205 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 KELP23276 732 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 PON1P27169 355 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 ACVRL1P37023 503 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 ATP1A2P50993 1020 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 MAPK10P53779 464 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 SRP54P61011 504 aaKnown RBP11.68□□□□□ -0.54
CMTM1-216ENST00000533078 RHOAP61586 193 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 ATP11AP98196 1134 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 GRM3Q14832 879 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 NFATC4Q14934 902 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 IRF4Q15306 451 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 TCEA2Q15560 299 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 TGIF1Q15583 401 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 LINC00303Q3SY05 128 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 MAP9Q49MG5 647 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 LRRC73Q5JTD7 316 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 PHF19Q5T6S3 580 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 XYLT1Q86Y38 959 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 PAF1Q8N7H5 531 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 Q8N9G6 341 aaPredicted RBP11.68□□□□□ -0.54
CMTM1-216ENST00000533078 TP53I13Q8NBR0 393 aaPredicted RBP11.68□□□□□ -0.54
CMTM1-216ENST00000533078 TBC1D31Q96DN5 1066 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 CFAP57Q96MR6 1250 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 WDR92Q96MX6 357 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 TMPRSS4Q9NRS4 437 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 RWDD2AQ9UIY3 292 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 PCDHGA4Q9Y5G9 962 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 UNC13CQ8NB66 2214 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 CACNB4O00305 520 aaPredicted RBP11.67□□□□□ -0.54
CMTM1-216ENST00000533078 FOXN3O00409 490 aaPredicted RBP11.67□□□□□ -0.54
CMTM1-216ENST00000533078 SUV39H1O43463 412 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 TMCC1O94876 653 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 PNLIPP16233 465 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 GLB1P16278 677 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 BMP6P22004 513 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 SDC4P31431 198 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 CDH5P33151 784 aaPredicted RBP11.67□□□□□ -0.54
CMTM1-216ENST00000533078 CLCN1P35523 988 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 FLT3P36888 993 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 NRG1Q02297 640 aaPredicted RBP11.67□□□□□ -0.54
CMTM1-216ENST00000533078 BIRC2Q13490 618 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 RAPGEF1Q13905 1077 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 CDO1Q16878 200 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 ALG11Q2TAA5 492 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 ATXN7L2Q5T6C5 722 aaPredicted RBP11.67□□□□□ -0.54
CMTM1-216ENST00000533078 ARCQ7LC44 396 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 TAF8Q7Z7C8 310 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 FAM114A1Q8IWE2 563 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 FAM71AQ8IYT1 594 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 APOOQ9BUR5 198 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 TTYH3Q9C0H2 523 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 SLC25A18Q9H1K4 315 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 MBNL1Q9NR56 388 aaKnown RBP11.67□□□□□ -0.54
CMTM1-216ENST00000533078 TMEM248Q9NWD8 314 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 DKK3Q9UBP4 350 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 ZNF212Q9UDV6 495 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 RABGEF1Q9UJ41 708 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 APPL1Q9UKG1 709 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 CHD5Q8TDI0 1954 aa11.67□□□□□ -0.54
CMTM1-216ENST00000533078 PRAMEF33A0A0G2JMD5 474 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 A0A1W2PQM1 296 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 CYSRT1A8MQ03 144 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 STMND1H3BQB6 276 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 PES1O00541 588 aaKnown RBP11.66□□□□□ -0.54
CMTM1-216ENST00000533078 KDELR3O43731 214 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 NOBOXO60393 691 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 PRAMEF10O60809 474 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 PCCBP05166 539 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 CELA2BP08218 269 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-216ENST00000533078 PRKCSHP14314 528 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-216ENST00000533078 CYP11B1P15538 503 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 ITIH1P19827 911 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 NFKB2Q00653 900 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 APBA1Q02410 837 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 MTM1Q13496 603 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 INPP5AQ14642 412 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 TBR1Q16650 682 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 TMEM52BQ4KMG9 183 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 INO80DQ53TQ3 878 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-216ENST00000533078 TAF3Q5VWG9 929 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 LEKR1Q6ZMV7 388 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 VASH2Q86V25 355 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 CCDC112Q8NEF3 446 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 FAM46DQ8NEK8 389 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 KIAA1524Q8TCG1 905 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 USP7Q93009 1102 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 RBM15Q96T37 977 aaKnown RBP eCLIP11.66□□□□□ -0.54
CMTM1-216ENST00000533078 B3GNT4Q9C0J1 378 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 ADNPQ9H2P0 1102 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 DPEP2Q9H4A9 486 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 METTL5Q9NRN9 209 aaKnown RBP11.66□□□□□ -0.54
CMTM1-216ENST00000533078 GEMIN8Q9NWZ8 242 aaKnown RBP11.66□□□□□ -0.54
CMTM1-216ENST00000533078 DONSONQ9NYP3 566 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 PNMA8BQ9ULN7 279 aaPredicted RBP11.66□□□□□ -0.54
CMTM1-216ENST00000533078 MFHAS1Q9Y4C4 1052 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 OR1A2Q9Y585 309 aa11.66□□□□□ -0.54
CMTM1-216ENST00000533078 ACTL7AQ9Y615 435 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms