RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 RIPPLY3P57055 190 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 MC2RQ01718 297 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 GPS2Q13227 327 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 MTA1Q13330 715 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 ASTE1Q2TB18 679 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 RILPL1Q5EBL4 403 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 FAM83HQ6ZRV2 1179 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 MED25Q71SY5 747 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 ADGRE4PQ86SQ3 457 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 CACUL1Q86Y37 369 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 PYROXD2Q8N2H3 581 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 LILRA3Q8N6C8 439 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 GALNT11Q8NCW6 608 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 PCDH19Q8TAB3 1148 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 JOSD2Q8TAC2 188 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 MRPS31Q92665 395 aaKnown RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 ERCC4Q92889 916 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 BHMTQ93088 406 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 SMARCD1Q96GM5 515 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 C1orf74Q96LT6 269 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 SLITRK1Q96PX8 696 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 CCDC3Q9BQI4 270 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 GTPBP2Q9BX10 602 aaKnown RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 PROK2Q9HC23 129 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 KRT82Q9NSB4 513 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 CUEDC1Q9NWM3 386 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 APOBEC2Q9Y235 224 aaKnown RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 PVALEFA0A1B0GWK0 134 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 C2CD4BA6NLJ0 364 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 MAN1A2O60476 641 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 RNGTTO60942 597 aaKnown RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 ZBED1O96006 694 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 CFIP05156 583 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 GOT1P17174 413 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 ATICP31939 592 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 SERPINH1P50454 418 aaKnown RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 KPNA1P52294 538 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 CCDC173Q0VFZ6 552 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 PPP2R5DQ14738 602 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 CA9Q16790 459 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 KNOP1Q1ED39 458 aaKnown RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 ATP13A4Q4VNC1 1196 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 HGSNATQ68CP4 663 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 ANKRD40Q6AI12 368 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 LVRNQ6Q4G3 990 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 ARHGAP36Q6ZRI8 547 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 RBM43Q6ZSC3 357 aaKnown RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 Q6ZSR6 202 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 UNC13DQ70J99 1090 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 PPP1R32Q7Z5V6 425 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 GPBP1Q86WP2 473 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 DENND1CQ8IV53 801 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 CSGALNACT2Q8N6G5 542 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 SLC37A2Q8TED4 501 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 CCDC12Q8WUD4 166 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 ZNF606Q8WXB4 792 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 GRAMD1AQ96CP6 724 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 ZSCAN31Q96LW9 406 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 LRFN5Q96NI6 719 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 ARHGAP9Q9BRR9 750 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 CHRNA10Q9GZZ6 450 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 FBXO8Q9NRD0 319 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 PDRG1Q9NUG6 133 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 HBS1LQ9Y450 684 aaKnown RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 IGHV5-51A0A0C4DH38 117 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 TBC1D3BA6NDS4 549 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 E5RJQ4 531 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 AURKAO14965 403 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 CLIC2O15247 247 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 KRT86O43790 486 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 EPHX1P07099 455 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 SLFN14P0C7P3 912 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 ENDOUP21128 410 aaKnown RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 IBSPP21815 317 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 PCSK1P29120 753 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 CCT6AP40227 531 aaKnown RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 CCNHP51946 323 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 TMPRSS3P57727 454 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 DPTQ07507 201 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 DPYSQ14117 519 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 EDRF1Q3B7T1 1238 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 SV2CQ496J9 727 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 PLEKHS1Q5SXH7 462 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 JMJD6Q6NYC1 403 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 DNAAF5Q86Y56 855 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 ZBTB8OSQ8IWT0 167 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 SMYD4Q8IYR2 804 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 GPD1LQ8N335 351 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 DCAF4L2Q8NA75 395 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 TSEN2Q8NCE0 465 aaKnown RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 OR7D4Q8NG98 312 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 SLC30A5Q8TAD4 765 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 CSGALNACT1Q8TDX6 532 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 EPS8L1Q8TE68 723 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 RNF138Q8WVD3 245 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 FAF2Q96CS3 445 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 SPAG5Q96R06 1193 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 DDA1Q9BW61 102 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 PLEKHF2Q9H8W4 249 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 SH2D2AQ9NP31 389 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms