RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 ITGB6P18564 788 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 PAX3P23760 479 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 CDH17Q12864 832 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 ITGA7Q13683 1181 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 KLHL35Q6PF15 583 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 TMED8Q6PL24 325 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-231ENST00000532463 CYP2U1Q7Z449 544 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 JAZF1Q86VZ6 243 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 FAM47BQ8NA70 645 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 MCCC1Q96RQ3 725 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-231ENST00000532463 SSX3Q99909 188 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 RNF38Q9H0F5 515 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 MAT2BQ9NZL9 334 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 KCND2Q9NZV8 630 aa8.17□□□□□ -1.1
CTNND1-231ENST00000532463 RPTORQ8N122 1335 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 FABP12A6NFH5 140 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 H3BNH8 94 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 FXR1P51114 621 aaKnown RBP eCLIP8.16□□□□□ -1.1
CTNND1-231ENST00000532463 RENBPP51606 427 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 ECT2LQ008S8 904 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 C1QBPQ07021 282 aaKnown RBP8.16□□□□□ -1.1
CTNND1-231ENST00000532463 ZNF267Q14586 743 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-231ENST00000532463 NR1I3Q14994 352 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 HYIQ5T013 277 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 SWT1Q5T5J6 900 aaKnown RBP8.16□□□□□ -1.1
CTNND1-231ENST00000532463 GCNT7Q6ZNI0 430 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 P2RY8Q86VZ1 359 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 SDR16C5Q8N3Y7 309 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 SETD6Q8TBK2 473 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 AUTS2Q8WXX7 1259 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 DYNLL2Q96FJ2 89 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 ZNF668Q96K58 619 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-231ENST00000532463 PCDHA3Q9Y5H8 950 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 DGKBQ9Y6T7 804 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 A2MP01023 1474 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 CYP3A7-CYP3A51PA0A087WV96 503 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 A0A0G2JMP0 313 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 E7ENX8 843 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 UNC5CO95185 931 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 USP17L8P0C7I0 530 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 MYBL2P10244 700 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 PSKH1P11801 424 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 PGAM1P18669 254 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 EPORP19235 508 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 CYP3A7P24462 503 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 HSD17B2P37059 387 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 ACOT2P49753 483 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 PDIA5Q14554 519 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 ARCQ7LC44 396 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 THAP5Q7Z6K1 395 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 OR4M2Q8NGB6 313 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 SPATA22Q8NHS9 363 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 UBA3Q8TBC4 463 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 ACTRT1Q8TDG2 376 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 TCTEX1D2Q8WW35 142 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 SEMA4DQ92854 862 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 SMARCD1Q96GM5 515 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 SENP6Q9GZR1 1112 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-231ENST00000532463 ANKRA2Q9H9E1 313 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 PEG3Q9GZU2 1588 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 PLEKHG1Q9ULL1 1385 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 A0A075B6Q4 140 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 FXYD6-FXYD2A0A087WZ82 144 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 USP17L15C9J2P7 530 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 USP17L13C9JLJ4 530 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 USP17L11C9JVI0 530 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 USP17L18D6R9N7 530 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 USP17L22D6RA61 530 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 USP17L17D6RBQ6 530 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 USP17L19D6RCP7 530 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 USP17L20D6RJB6 530 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 M0R129 80 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 SUV39H1O43463 412 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 COX4I1P13073 169 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 PRKCDQ05655 676 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 USP17L24Q0WX57 530 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 USP17L6PQ6QN14 398 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 ARSKQ6UWY0 536 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 LAPTM4BQ86VI4 370 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 KCNMB4Q86W47 210 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 FBXO25Q8TCJ0 367 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 SNX33Q8WV41 574 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 PPP3R2Q96LZ3 170 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 FXYD6Q9H0Q3 95 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 RNF146Q9NTX7 359 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 ABCD2Q9UBJ2 740 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 PCDHGB5Q9Y5G0 923 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 TAF6LQ9Y6J9 622 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 LOC100509620A0A075B734 347 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 AIREO43918 545 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 CPNE3O75131 537 aaKnown RBP8.16□□□□□ -1.1
CTNND1-231ENST00000532463 GABBR2O75899 941 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 VNN2O95498 520 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 FDX1P10109 184 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 MAPK9P45984 424 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 RASGEF1BQ0VAM2 473 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 HERC3Q15034 1050 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 NKX1-1Q15270 411 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-231ENST00000532463 ZCCHC12Q6PEW1 402 aa8.16□□□□□ -1.1
CTNND1-231ENST00000532463 LINGO2Q7L985 606 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms