RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TRIM32Q13049 653 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 POLNQ7Z5Q5 900 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 GALNT13Q8IUC8 556 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 NRSN1Q8IZ57 195 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 PRRG3Q9BZD7 231 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 TNKS2Q9H2K2 1166 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 SLC24A3Q9HC58 644 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 DDX28Q9NUL7 540 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 SAE1Q9UBE0 346 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 TBC1D30Q9Y2I9 924 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 UBXN8O00124 270 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 SEC22BO75396 215 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 CCT8P50990 548 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 ABRQ12979 859 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 EOGTQ5NDL2 527 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 ZCCHC8Q6NZY4 707 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 FAM151BQ6UXP7 276 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 KYAT3Q6YP21 454 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 CREG2Q8IUH2 290 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 RAVER1Q8IY67 606 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 C10orf88Q9H8K7 445 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 PSME2Q9UL46 239 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 RPS7P62081 194 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 CBX2Q14781 532 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 MAMDC4Q6UXC1 1216 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 BPIFB1Q8TDL5 484 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 ATXN2LQ8WWM7 1075 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 USP7Q93009 1102 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 LPIN3Q9BQK8 851 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 ELOVL2Q9NXB9 296 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 RAB21Q9UL25 225 aa11.37□□□□□ -0.59
PTPRK-221ENST00000532331 TNPO3Q9Y5L0 923 aaKnown RBP11.37□□□□□ -0.59
PTPRK-221ENST00000532331 KCNU1A8MYU2 1149 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 CCNDBP1O95273 360 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 ADH5P11766 374 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 LMO2P25791 158 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 DEFA1P59665 94 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 DEFA3P59666 94 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 RPL7AP62424 266 aaKnown RBP11.36□□□□□ -0.59
PTPRK-221ENST00000532331 IRF8Q02556 426 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 GNA12Q03113 381 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 ZNF844Q08AG5 666 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 TBL3Q12788 808 aaKnown RBP11.36□□□□□ -0.59
PTPRK-221ENST00000532331 MSLNQ13421 630 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-221ENST00000532331 KHDRBS2Q5VWX1 349 aaKnown RBP11.36□□□□□ -0.59
PTPRK-221ENST00000532331 LINGO4Q6UY18 593 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 LNX1Q8TBB1 728 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-221ENST00000532331 USP6NLQ92738 828 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 TBC1D23Q9NUY8 699 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 GMEB2Q9UKD1 530 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 NDUFAF1Q9Y375 327 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 SNED1Q8TER0 1413 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 NCANO14594 1321 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 FKBP6O75344 327 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 GSTM1P09488 218 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 KCNA5P22460 613 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 GPR15P49685 360 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 IRF5Q13568 498 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 PTPN20Q4JDL3 420 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 FAM45BPQ6NSW5 357 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 FAM45AQ8TCE6 357 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 POMKQ9H5K3 350 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 DCLRE1BQ9H816 532 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 TCF3P15923 654 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 PSMC3P17980 439 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 POU1F1P28069 291 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 MAPKAPK2P49137 400 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 VAC14Q08AM6 782 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 CCDC142Q17RM4 750 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 XYLT1Q86Y38 959 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 ANKLE1Q8NAG6 615 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 HDAC7Q8WUI4 952 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 CPXM1Q96SM3 734 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 MAGEH1Q9H213 219 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 ABCB8Q9NUT2 735 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 CROTQ9UKG9 612 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 SQORQ9Y6N5 450 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 MAGEA13PA6NCF6 341 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 SLC31A1O15431 190 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 FAM153BP0C7A2 387 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 ADRA1DP25100 572 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 BLKP51451 505 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 FASTKQ14296 549 aaKnown RBP11.36□□□□□ -0.59
PTPRK-221ENST00000532331 FAM187BQ17R55 369 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 FAM153CQ494X1 144 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 DEFB107AQ8IZN7 70 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 RBFAQ8N0V3 343 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 LGMNQ99538 433 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 BCO2Q9BYV7 579 aa11.36□□□□□ -0.59
PTPRK-221ENST00000532331 BTNL10A8MVZ5 291 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 RGS14O43566 566 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ALADP13716 330 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 ATP6V1C1P21283 382 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 MAT2AP31153 395 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 KPNB1Q14974 876 aaKnown RBP11.35□□□□□ -0.59
PTPRK-221ENST00000532331 PLA2G4EQ3MJ16 856 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 RIPOR1Q6ZS17 1223 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 KLHL23Q8NBE8 558 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 SLC4A11Q8NBS3 891 aa11.35□□□□□ -0.59
PTPRK-221ENST00000532331 JOSD2Q8TAC2 188 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms