RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 DENND6BQ8NEG7 585 aa23.19■■□□□ 1.3
CAPN1-222ENST00000532285 OR13H1Q8NG92 308 aa23.19■■□□□ 1.3
CAPN1-222ENST00000532285 SAP25Q8TEE9 199 aa23.19■■□□□ 1.3
CAPN1-222ENST00000532285 BMFQ96LC9 184 aa23.19■■□□□ 1.3
CAPN1-222ENST00000532285 COL5A1P20908 1838 aaPredicted RBP23.19■■□□□ 1.3
CAPN1-222ENST00000532285 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.18■■□□□ 1.3
CAPN1-222ENST00000532285 ZNF487B1APH4 448 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 FPGTO14772 594 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 RAD51BO15315 384 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 MFSD11O43934 449 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 MMP20O60882 483 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 TM7SF2O76062 418 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 ITGAVP06756 1048 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 ITIH2P19823 946 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 GARSP41250 739 aaKnown RBP23.18■■□□□ 1.3
CAPN1-222ENST00000532285 POLR2LP62875 67 aaKnown RBP23.18■■□□□ 1.3
CAPN1-222ENST00000532285 GALNT2Q10471 571 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 LRRC38Q5VT99 294 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 ERAP2Q6P179 960 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 KYAT3Q6YP21 454 aaKnown RBP23.18■■□□□ 1.3
CAPN1-222ENST00000532285 Q6ZSR6 202 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 GATAD2AQ86YP4 633 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 RAPGEF5Q92565 580 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 KLF6Q99612 283 aaPredicted RBP23.18■■□□□ 1.3
CAPN1-222ENST00000532285 C1QTNF7Q9BXJ2 289 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 PCDH12Q9NPG4 1184 aa23.18■■□□□ 1.3
CAPN1-222ENST00000532285 LUC7LQ9NQ29 371 aaKnown RBP23.18■■□□□ 1.3
CAPN1-222ENST00000532285 POM121BA6NF01 834 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 TRIM16O95361 564 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 EPHA8P29322 1005 aaPredicted RBP23.17■■□□□ 1.3
CAPN1-222ENST00000532285 MMP13P45452 471 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 HADHBP55084 474 aaKnown RBP23.17■■□□□ 1.3
CAPN1-222ENST00000532285 FOXC1Q12948 553 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 IFI16Q16666 785 aaKnown RBP23.17■■□□□ 1.3
CAPN1-222ENST00000532285 PTAR1Q7Z6K3 402 aaPredicted RBP23.17■■□□□ 1.3
CAPN1-222ENST00000532285 VSIG1Q86XK7 387 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 PGBD5Q8N414 524 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 PQLC3Q8N755 202 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 ECHDC3Q96DC8 303 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 RNF157Q96PX1 679 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 NUDCD1Q96RS6 583 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 MGME1Q9BQP7 344 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 WRAP53Q9BUR4 548 aaKnown RBP23.17■■□□□ 1.3
CAPN1-222ENST00000532285 APOBEC2Q9Y235 224 aaKnown RBP23.17■■□□□ 1.3
CAPN1-222ENST00000532285 PCDHA13Q9Y5I0 950 aa23.17■■□□□ 1.3
CAPN1-222ENST00000532285 LRRD1A4D1F6 860 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 TRAFD1O14545 582 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-222ENST00000532285 RIOK3O14730 519 aaKnown RBP23.16■■□□□ 1.3
CAPN1-222ENST00000532285 CR2P20023 1033 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 NOP2P46087 812 aaKnown RBP23.16■■□□□ 1.3
CAPN1-222ENST00000532285 RABIFP47224 123 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 BNIP3Q12983 259 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 RALGPS1Q5JS13 557 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 TIGD7Q6NT04 549 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-222ENST00000532285 ZSWIM9Q86XI8 627 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 TMTC1Q8IUR5 882 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 RHOT1Q8IXI2 618 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 TEX26Q8N6G2 289 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 PAF1Q8N7H5 531 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 CENPTQ96BT3 561 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 IFT43Q96FT9 208 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 TSGA13Q96PP4 275 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 SCUBE2Q9NQ36 999 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 DDX56Q9NY93 547 aaKnown RBP23.16■■□□□ 1.3
CAPN1-222ENST00000532285 ATP8A1Q9Y2Q0 1164 aa23.16■■□□□ 1.3
CAPN1-222ENST00000532285 FTH1P19P0C7X4 201 aa23.15■■□□□ 1.3
CAPN1-222ENST00000532285 MX2P20592 715 aa23.15■■□□□ 1.3
CAPN1-222ENST00000532285 FECHP22830 423 aa23.15■■□□□ 1.3
CAPN1-222ENST00000532285 CCNCP24863 283 aa23.15■■□□□ 1.3
CAPN1-222ENST00000532285 MMP12P39900 470 aa23.15■■□□□ 1.3
CAPN1-222ENST00000532285 ODF2Q5BJF6 829 aa23.15■■□□□ 1.3
CAPN1-222ENST00000532285 SLC22A18ASQ8N1D0 253 aa23.15■■□□□ 1.3
CAPN1-222ENST00000532285 FATE1Q969F0 183 aa23.15■■□□□ 1.3
CAPN1-222ENST00000532285 GPR27Q9NS67 375 aa23.15■■□□□ 1.3
CAPN1-222ENST00000532285 WASF3Q9UPY6 502 aa23.15■■□□□ 1.3
CAPN1-222ENST00000532285 A0A0A6YYK5 440 aaPredicted RBP23.14■■□□□ 1.29
CAPN1-222ENST00000532285 A0A1W2PQ67 120 aa23.14■■□□□ 1.29
CAPN1-222ENST00000532285 TTC24A2A3L6 582 aaPredicted RBP23.14■■□□□ 1.29
CAPN1-222ENST00000532285 C3orf70A6NLC5 250 aaPredicted RBP23.14■■□□□ 1.29
CAPN1-222ENST00000532285 MATN3O15232 486 aa23.14■■□□□ 1.29
CAPN1-222ENST00000532285 TNFSF14O43557 240 aa23.14■■□□□ 1.29
CAPN1-222ENST00000532285 SPOPO43791 374 aa23.14■■□□□ 1.29
CAPN1-222ENST00000532285 SOCS5O75159 536 aa23.14■■□□□ 1.29
CAPN1-222ENST00000532285 COMTP21964 271 aa23.14■■□□□ 1.29
CAPN1-222ENST00000532285 SPOCK2Q92563 424 aa23.14■■□□□ 1.29
CAPN1-222ENST00000532285 NSMCE3Q96MG7 304 aa23.14■■□□□ 1.29
CAPN1-222ENST00000532285 MAK16Q9BXY0 300 aaKnown RBP23.14■■□□□ 1.29
CAPN1-222ENST00000532285 NOD2Q9HC29 1040 aa23.14■■□□□ 1.29
CAPN1-222ENST00000532285 NT5MQ9NPB1 228 aa23.14■■□□□ 1.29
CAPN1-222ENST00000532285 FTSJ1Q9UET6 329 aa23.14■■□□□ 1.29
CAPN1-222ENST00000532285 EPN1Q9Y6I3 576 aaPredicted RBP23.14■■□□□ 1.29
CAPN1-222ENST00000532285 ARID1BQ8NFD5 2236 aaPredicted RBP23.13■■□□□ 1.29
CAPN1-222ENST00000532285 SPTY2D1-AS1A0A0U1RR47 76 aa23.13■■□□□ 1.29
CAPN1-222ENST00000532285 CFAP69A5D8W1 941 aa23.13■■□□□ 1.29
CAPN1-222ENST00000532285 HTRA2O43464 458 aaPredicted RBP23.13■■□□□ 1.29
CAPN1-222ENST00000532285 NDUFA10O95299 355 aa23.13■■□□□ 1.29
CAPN1-222ENST00000532285 MAP3K6O95382 1288 aa23.13■■□□□ 1.29
CAPN1-222ENST00000532285 PFN3P60673 137 aa23.13■■□□□ 1.29
CAPN1-222ENST00000532285 MAXP61244 160 aa23.13■■□□□ 1.29
CAPN1-222ENST00000532285 GBE1Q04446 702 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms