RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 EIF4A3P38919 411 aaKnown RBP16.99■□□□□ 0.31
CPSF1-207ENST00000531727 IRF4Q15306 451 aa16.99■□□□□ 0.31
CPSF1-207ENST00000531727 CA9Q16790 459 aa16.99■□□□□ 0.31
CPSF1-207ENST00000531727 ANO6Q4KMQ2 910 aa16.99■□□□□ 0.31
CPSF1-207ENST00000531727 GUSBP11Q6P575 273 aa16.99■□□□□ 0.31
CPSF1-207ENST00000531727 CELF6Q96J87 481 aaKnown RBP16.99■□□□□ 0.31
CPSF1-207ENST00000531727 ZNF641Q96N77 438 aaPredicted RBP16.99■□□□□ 0.31
CPSF1-207ENST00000531727 BBC3Q96PG8 261 aaPredicted RBP16.99■□□□□ 0.31
CPSF1-207ENST00000531727 PEBP4Q96S96 227 aa16.99■□□□□ 0.31
CPSF1-207ENST00000531727 SNRNP25Q9BV90 132 aaKnown RBP16.99■□□□□ 0.31
CPSF1-207ENST00000531727 LRRC61Q9BV99 259 aa16.99■□□□□ 0.31
CPSF1-207ENST00000531727 SLC13A1Q9BZW2 595 aa16.99■□□□□ 0.31
CPSF1-207ENST00000531727 SLC39A8Q9C0K1 460 aa16.99■□□□□ 0.31
CPSF1-207ENST00000531727 TCEAL2Q9H3H9 227 aaPredicted RBP16.99■□□□□ 0.31
CPSF1-207ENST00000531727 SUV39H2Q9H5I1 410 aa16.99■□□□□ 0.31
CPSF1-207ENST00000531727 TMEM63CQ9P1W3 806 aa16.99■□□□□ 0.31
CPSF1-207ENST00000531727 CPED1A4D0V7 1026 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 EME2A4GXA9 379 aaPredicted RBP16.98■□□□□ 0.31
CPSF1-207ENST00000531727 TMEM191CA6NGB0 347 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 SMTNL1A8MU46 457 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 LMO7DNF2Z398 122 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 GCATO75600 419 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 PAPOLAP51003 745 aaKnown RBP16.98■□□□□ 0.31
CPSF1-207ENST00000531727 C1orf61Q13536 156 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 ACAP1Q15027 740 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 LRRC14Q15048 493 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 NR0B2Q15466 257 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 ASIC2Q16515 512 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 UGP2Q16851 508 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 PRRT3Q5FWE3 981 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 ERMARDQ5T6L9 678 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 FAXCQ5TGI0 409 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 BRAT1Q6PJG6 821 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 EFL1Q7Z2Z2 1120 aaKnown RBP16.98■□□□□ 0.31
CPSF1-207ENST00000531727 ARFGAP1Q8N6T3 406 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 GLMNQ92990 594 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 TUBGCP5Q96RT8 1024 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 BOCQ9BWV1 1114 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 HAUS4Q9H6D7 363 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 PCDH12Q9NPG4 1184 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 PCSK1NQ9UHG2 260 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 COQ6Q9Y2Z9 468 aa16.98■□□□□ 0.31
CPSF1-207ENST00000531727 IGSF10Q6WRI0 2623 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 DAPK3O43293 454 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 BUB1BO60566 1050 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-207ENST00000531727 USP12O75317 370 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 RNF8O76064 485 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 MPOP05164 745 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 ANXA6P08133 673 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 GZMAP12544 262 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 C6P13671 934 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 TGM2P21980 687 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 MMP12P39900 470 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 CSNK1DP48730 415 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 RPIAP49247 311 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 PEX5P50542 639 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 ADKP55263 362 aaKnown RBP16.97■□□□□ 0.31
CPSF1-207ENST00000531727 PPARDQ03181 441 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 AGERQ15109 404 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 WSCD2Q2TBF2 565 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 FILIP1LQ4L180 1135 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 C6orf132Q5T0Z8 1188 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 CFAP58Q5T655 872 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 AFMIDQ63HM1 303 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 ERAP2Q6P179 960 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 RFX8Q6ZV50 586 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 CYP4V2Q6ZWL3 525 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-207ENST00000531727 ZNF571Q7Z3V5 609 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-207ENST00000531727 PSTKQ8IV42 348 aaKnown RBP16.97■□□□□ 0.31
CPSF1-207ENST00000531727 TSEN2Q8NCE0 465 aaKnown RBP16.97■□□□□ 0.31
CPSF1-207ENST00000531727 TPCN2Q8NHX9 752 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 FNIP1Q8TF40 1166 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 ZNF578Q96N58 590 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-207ENST00000531727 KCTD15Q96SI1 283 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-207ENST00000531727 TRIM7Q9C029 511 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 PRORYQ9H606 182 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 AIPL1Q9NZN9 384 aa16.97■□□□□ 0.31
CPSF1-207ENST00000531727 ANKRD36A6QL64 1941 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 A0A1W2PQC6 194 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 TMEM110-MUSTN1A8MSY1 372 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 MUSKO15146 869 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 YY2O15391 372 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 DXOO77932 396 aaKnown RBP16.96■□□□□ 0.31
CPSF1-207ENST00000531727 FTLP02792 175 aaPredicted RBP16.96■□□□□ 0.31
CPSF1-207ENST00000531727 TSHRP16473 764 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 ERCC2P18074 760 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 MIPP30301 263 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 PRKCIP41743 596 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 RGRP47804 291 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 LSSP48449 732 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 LIG3P49916 1009 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 BLKP51451 505 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 ZNF135P52742 658 aaPredicted RBP16.96■□□□□ 0.31
CPSF1-207ENST00000531727 GABREP78334 506 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 CCDC173Q0VFZ6 552 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 ISXQ2M1V0 245 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 E4F1Q66K89 784 aaPredicted RBP16.96■□□□□ 0.31
CPSF1-207ENST00000531727 SRLQ86TD4 932 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 ZSWIM9Q86XI8 627 aa16.96■□□□□ 0.31
CPSF1-207ENST00000531727 CAMK1DQ8IU85 385 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms