RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 H7C0C1 242 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 CEP104O60308 925 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 NDUFS2O75306 463 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 EPN2O95208 641 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 PRLP01236 227 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 LMNAP02545 664 aaKnown RBP14.59□□□□□ -0.07
CPSF1-206ENST00000531480 IGHV4-34P06331 123 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 SERPINF2P08697 491 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 TCP1P17987 556 aaKnown RBP14.59□□□□□ -0.07
CPSF1-206ENST00000531480 HOXD12P35452 270 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 ABL2P42684 1182 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 PTGER3P43115 390 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 ATP5OP48047 213 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 ETF1P62495 437 aaKnown RBP14.59□□□□□ -0.07
CPSF1-206ENST00000531480 SKOR1P84550 965 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 TRAF2Q12933 501 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 FBXL19Q6PCT2 694 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 NYAP1Q6ZVC0 841 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 TMEFF1Q8IYR6 380 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 C17orf53Q8N3J3 647 aaPredicted RBP14.59□□□□□ -0.07
CPSF1-206ENST00000531480 OR14C36Q8NHC7 312 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 COG1Q8WTW3 980 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 AGAP3Q96P47 875 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 FCRL5Q96RD9 977 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 FAM118BQ9BPY3 351 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 TDRD1Q9BXT4 1180 aaKnown RBP14.59□□□□□ -0.07
CPSF1-206ENST00000531480 PCDHGC4Q9Y5F7 938 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 PCDHGA5Q9Y5G8 931 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 GON4LQ3T8J9 2241 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 SDK1Q7Z5N4 2213 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 LAMA1P25391 3075 aa14.59□□□□□ -0.07
CPSF1-206ENST00000531480 PTPRZ1P23471 2315 aaPredicted RBP14.58□□□□□ -0.08
CPSF1-206ENST00000531480 CACNA1EQ15878 2313 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 UPK3BL1B0FP48 263 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 UPK3BL2E5RIL1 263 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 MAP3K13O43283 966 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 TSPAN6O43657 245 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 PGLSO95336 258 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 ITGAVP06756 1048 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 CASQ1P31415 396 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 STIP1P31948 543 aaKnown RBP14.58□□□□□ -0.08
CPSF1-206ENST00000531480 PI4KAP42356 2102 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 RPL26P61254 145 aaKnown RBP14.58□□□□□ -0.08
CPSF1-206ENST00000531480 POLR2LP62875 67 aaKnown RBP14.58□□□□□ -0.08
CPSF1-206ENST00000531480 TMEM259Q4ZIN3 620 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 KIAA0895LQ68EN5 471 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 DARS2Q6PI48 645 aaKnown RBP14.58□□□□□ -0.08
CPSF1-206ENST00000531480 PRR23BQ6ZRT6 265 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 GANCQ8TET4 914 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 PIH1D2Q8WWB5 315 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 ATG4AQ8WYN0 398 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 SPATA13Q96N96 652 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 MCCC1Q96RQ3 725 aaPredicted RBP14.58□□□□□ -0.08
CPSF1-206ENST00000531480 TRIB3Q96RU7 358 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 NAPGQ99747 312 aaPredicted RBP14.58□□□□□ -0.08
CPSF1-206ENST00000531480 HINFPQ9BQA5 517 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 FERMT1Q9BQL6 677 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 CEP41Q9BYV8 373 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 C10orf88Q9H8K7 445 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 VPS45Q9NRW7 570 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 SEPT10Q9P0V9 454 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 RPL26L1Q9UNX3 145 aaKnown RBP14.58□□□□□ -0.08
CPSF1-206ENST00000531480 DRG1Q9Y295 367 aaKnown RBP14.58□□□□□ -0.08
CPSF1-206ENST00000531480 RAI2Q9Y5P3 530 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 PLXNA2O75051 1894 aa14.58□□□□□ -0.08
CPSF1-206ENST00000531480 RIF1Q5UIP0 2472 aaKnown RBP14.57□□□□□ -0.08
CPSF1-206ENST00000531480 RIOK3O14730 519 aaKnown RBP14.57□□□□□ -0.08
CPSF1-206ENST00000531480 KCNN4O15554 427 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 OPHN1O60890 802 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 GCATO75600 419 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 NEBLO76041 1014 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 RETP07949 1114 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 NUDT1P36639 197 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 MMP12P39900 470 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 CD86P42081 329 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 DPP6P42658 865 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 PPP2CBP62714 309 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 PPP2CAP67775 309 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 ITKQ08881 620 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 ELP6Q0PNE2 266 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 CYP1B1Q16678 543 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 TMEM52BQ4KMG9 183 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 PLA2G2CQ5R387 149 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 ANKRD20A2Q5SQ80 823 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 ANKRD20A1Q5TYW2 823 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 ANKRD20A3Q5VUR7 823 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 KIAA1161Q6NSJ0 714 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 TTC7BQ86TV6 843 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 PRELID2Q8N945 189 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 C12orf50Q8NA57 414 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-206ENST00000531480 ASB12Q8WXK4 309 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 BIRC7Q96CA5 298 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 HSPA12BQ96MM6 686 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 NAP1L3Q99457 506 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-206ENST00000531480 GORASP1Q9BQQ3 440 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 TMEM121Q9BTD3 319 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 GBA3Q9H227 469 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 HOMER3Q9NSC5 361 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 PILRBQ9UKJ0 227 aa14.57□□□□□ -0.08
CPSF1-206ENST00000531480 RAB23Q9ULC3 237 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms