RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 CAND1Q86VP6 1230 aaKnown RBP19.21■□□□□ 0.67
SMPD1-205ENST00000531303 MMAAQ8IVH4 418 aaKnown RBP19.21■□□□□ 0.67
SMPD1-205ENST00000531303 ZNF687Q8N1G0 1237 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 FLCNQ8NFG4 579 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 RUBCNQ92622 972 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 VOPP1Q96AW1 172 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 RMDN1Q96DB5 314 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 SERPINB12Q96P63 405 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 SMIM14Q96QK8 99 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 FMO2Q99518 471 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 GABRG3Q99928 467 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 SARDHQ9UL12 918 aa19.21■□□□□ 0.67
SMPD1-205ENST00000531303 LOC285095A0A1B0GVY8 99 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 KPNA3O00505 521 aaPredicted RBP19.2■□□□□ 0.66
SMPD1-205ENST00000531303 PGLSO95336 258 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 NDST3O95803 873 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 PRLP01236 227 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 FAM153BP0C7A2 387 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 EPHB1P54762 984 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 ARL4CP56559 192 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 GRM3Q14832 879 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 SLC1A5Q15758 541 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 SLC14A2Q15849 920 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 BBS9Q3SYG4 887 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 FAM153CQ494X1 144 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 LRRC8BQ6P9F7 803 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 ZCCHC9Q8N567 271 aaKnown RBP19.2■□□□□ 0.66
SMPD1-205ENST00000531303 PIP4K2CQ8TBX8 421 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 TRIB3Q96RU7 358 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 NELL2Q99435 816 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 CASS4Q9NQ75 786 aa19.2■□□□□ 0.66
SMPD1-205ENST00000531303 SMAPO00193 183 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 TRAFD1O14545 582 aaPredicted RBP19.19■□□□□ 0.66
SMPD1-205ENST00000531303 PRNPP04156 253 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 ATXN1LP0C7T5 689 aaKnown RBP19.19■□□□□ 0.66
SMPD1-205ENST00000531303 PIRTP0C851 137 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 CTPS1P17812 591 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 MCM3P25205 808 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 TNFRSF8P28908 595 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 SLC8A1P32418 973 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 PSMD8P48556 350 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 CAMK2GQ13555 558 aaPredicted RBP19.19■□□□□ 0.66
SMPD1-205ENST00000531303 HIF1AQ16665 826 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 MSS51Q4VC12 460 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 EOGTQ5NDL2 527 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 DENND5AQ6IQ26 1287 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 DSG4Q86SJ6 1040 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 PDIK1LQ8N165 341 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 ZNF641Q96N77 438 aaPredicted RBP19.19■□□□□ 0.66
SMPD1-205ENST00000531303 ADGRE3Q9BY15 652 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 XAB2Q9HCS7 855 aaKnown RBP19.19■□□□□ 0.66
SMPD1-205ENST00000531303 RAB21Q9UL25 225 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 PPM1HQ9ULR3 514 aa19.19■□□□□ 0.66
SMPD1-205ENST00000531303 ARIH1Q9Y4X5 557 aaPredicted RBP19.19■□□□□ 0.66
SMPD1-205ENST00000531303 A0A1W2PQF6 199 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 HTRA2O43464 458 aaPredicted RBP19.18■□□□□ 0.66
SMPD1-205ENST00000531303 SOCS5O75159 536 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 EPOP01588 193 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 PRKCGP05129 697 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 MGAT1P26572 445 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 METAP1P53582 386 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 CRADDP78560 199 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 CDH17Q12864 832 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 PDIA2Q13087 525 aaKnown RBP19.18■□□□□ 0.66
SMPD1-205ENST00000531303 FZD5Q13467 585 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 PTPRRQ15256 657 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 LRRC73Q5JTD7 316 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 CERCAMQ5T4B2 595 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 ZSWIM9Q86XI8 627 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 SLC6A17Q9H1V8 727 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 MFSD1Q9H3U5 465 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 SAYSD1Q9NPB0 183 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 MMP17Q9ULZ9 603 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 MYLKQ15746 1914 aa19.18■□□□□ 0.66
SMPD1-205ENST00000531303 PLK4O00444 970 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 ALOX15BO15296 676 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 FZD6O60353 706 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 RNASEH1O60930 286 aaKnown RBP19.17■□□□□ 0.66
SMPD1-205ENST00000531303 CPP00450 1065 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 TUBBP07437 444 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 HLA-DPA1P20036 260 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 SEMG2Q02383 582 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 DHX9Q08211 1270 aaKnown RBP19.17■□□□□ 0.66
SMPD1-205ENST00000531303 QPCTQ16769 361 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 ZNF805Q5CZA5 627 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 TMEM92Q6UXU6 159 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 TRIM67Q6ZTA4 783 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 CENPUQ71F23 418 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 ANKMY2Q8IV38 441 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 MPP5Q8N3R9 675 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 SYNPOQ8N3V7 929 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 TMIEQ8NEW7 156 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 OR2T3Q8NH03 318 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 PIH1D2Q8WWB5 315 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 LRIG1Q96JA1 1093 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 OSBPL1AQ9BXW6 950 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 FAM129AQ9BZQ8 928 aa19.17■□□□□ 0.66
SMPD1-205ENST00000531303 A8MX80 341 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 ANKRD66B4E2M5 251 aa19.16■□□□□ 0.66
SMPD1-205ENST00000531303 C1QTNF3-AMACRE9PGA6 284 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms