RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 ERVK-21P61565 698 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 PSMC1P62191 440 aaKnown RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 HABP2Q14520 560 aaPredicted RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 KRT31Q15323 416 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 TWIST1Q15672 202 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 PTPN21Q16825 1174 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 FLYWCH1Q4VC44 716 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 MARCH8Q5T0T0 291 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 ICE2Q659A1 982 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 TWF2Q6IBS0 349 aaKnown RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 SLC27A1Q6PCB7 646 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 PGM2L1Q6PCE3 622 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 LAYNQ6UX15 382 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 ANKRD33Q7Z3H0 272 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 DTX2Q86UW9 622 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 FAM186BQ8IYM0 893 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 DAW1Q8N136 415 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 CCAR2Q8N163 923 aaKnown RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 GPD1LQ8N335 351 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 TMEM199Q8N511 208 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 LINC01465Q8N7H1 131 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 PNLDC1Q8NA58 520 aaKnown RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 ZNF397Q8NF99 534 aaPredicted RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 NSMCE1Q8WV22 266 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 SEPT8Q92599 483 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 RAB24Q969Q5 203 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 DAZAP1Q96EP5 407 aaKnown RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 MRGPRX4Q96LA9 322 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 FAM81BQ96LP2 452 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 ACO2Q99798 780 aaKnown RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 FAM118BQ9BPY3 351 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 STRA6Q9BX79 667 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 QTRT1Q9BXR0 403 aaKnown RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 TTYH3Q9C0H2 523 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 MTIF3Q9H2K0 278 aaKnown RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 HIPK3Q9H422 1215 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 FZD8Q9H461 694 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 EBF3Q9H4W6 596 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 RPF1Q9H9Y2 349 aaKnown RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 AGPAT3Q9NRZ7 376 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 C1orf112Q9NSG2 853 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 VSX1Q9NZR4 365 aaPredicted RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 MCM8Q9UJA3 840 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 AGO2Q9UKV8 859 aaKnown RBP4.34□□□□□ -1.71
SOX6-214ENST00000531297 SLC45A2Q9UMX9 530 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 TNFSF13BQ9Y275 285 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 DAAM1Q9Y4D1 1078 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 MYH11P35749 1972 aa4.34□□□□□ -1.71
SOX6-214ENST00000531297 SCN10AQ9Y5Y9 1956 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 A0A1B0GUA9 196 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 KLHL33A6NCF5 533 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 KCNJ18B7U540 433 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 CLIC2O15247 247 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 P4HA2O15460 535 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 TNNC2P02585 160 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 AFPP02771 609 aaKnown RBP4.33□□□□□ -1.72
SOX6-214ENST00000531297 GYPCP04921 128 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 CLTBP09497 229 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 DLDP09622 509 aaKnown RBP4.33□□□□□ -1.72
SOX6-214ENST00000531297 CCDC172P0C7W6 258 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 STAG3L1P0CL83 205 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 SKILP12757 684 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 P4HA1P13674 534 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 ATF7P17544 494 aaPredicted RBP4.33□□□□□ -1.72
SOX6-214ENST00000531297 TNNI1P19237 187 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 CYP2C18P33260 490 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 ZNF135P52742 658 aaPredicted RBP4.33□□□□□ -1.72
SOX6-214ENST00000531297 COPB1P53618 953 aaKnown RBP4.33□□□□□ -1.72
SOX6-214ENST00000531297 TLE2Q04725 743 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 MBTD1Q05BQ5 628 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 MCL1Q07820 350 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 GOLGA8FQ08AF8 430 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 GOLGA8DPQ0D2H9 430 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 PPIGQ13427 754 aaKnown RBP eCLIP4.33□□□□□ -1.72
SOX6-214ENST00000531297 TRIM14Q14142 442 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 KCNJ12Q14500 433 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 SNRNP35Q16560 246 aaKnown RBP4.33□□□□□ -1.72
SOX6-214ENST00000531297 ZC2HC1CQ53FD0 456 aaPredicted RBP4.33□□□□□ -1.72
SOX6-214ENST00000531297 TCP11X2Q5H9J9 407 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 RUSC1-AS1Q66K80 236 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 SPECC1LQ69YQ0 1117 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 ANKRD40Q6AI12 368 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 TRIM65Q6PJ69 517 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 SLC2A7Q6PXP3 512 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 TRIM72Q6ZMU5 477 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 LRRC8DQ7L1W4 858 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 ZDHHC17Q8IUH5 632 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 SAMD14Q8IZD0 417 aaPredicted RBP4.33□□□□□ -1.72
SOX6-214ENST00000531297 TTC39CQ8N584 583 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 MYRIPQ8NFW9 859 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 RP9Q8TA86 221 aaKnown RBP4.33□□□□□ -1.72
SOX6-214ENST00000531297 URGCPQ8TCY9 931 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 HPS3Q969F9 1004 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 REPS1Q96D71 796 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 ANKRD36BP1Q96IX9 119 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 LRIG1Q96JA1 1093 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 CNOT6LQ96LI5 555 aaKnown RBP4.33□□□□□ -1.72
SOX6-214ENST00000531297 RPS6KC1Q96S38 1066 aa4.33□□□□□ -1.72
SOX6-214ENST00000531297 LBHD1Q9BQE6 289 aaPredicted RBP4.33□□□□□ -1.72
SOX6-214ENST00000531297 NUP58Q9BVL2 599 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms